RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SPACA1Q9HBV2 294 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 PEX16Q9Y5Y5 336 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 ATRQ13535 2644 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 MEIKINA0A087WXM9 373 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 TRAV39A0A0B4J263 110 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 A0A1W2PPH5 198 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 FUOMA2VDF0 154 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 IGHV1-69P01742 117 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 GDNFP39905 211 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 TMEM50BP56557 158 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 CTF1Q16619 201 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 UTF1Q5T230 341 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 SLC35E4Q6ICL7 350 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 C6orf201Q7Z4U5 140 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 ANKRD13BQ86YJ7 626 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 SULT4A1Q9BR01 284 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 DAPK2Q9UIK4 370 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 TRGV10A0A0A0MS01 117 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 CLPXO76031 633 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 GABARAPO95166 117 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 OMGP23515 440 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 RPS19P39019 145 aaKnown RBP11.68□□□□□ -0.54
CBWD3-217ENST00000621474 VBP1P61758 197 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 BLMHQ13867 455 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 MOGAT2Q3SYC2 334 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 Q6ZPA2 131 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 TRAPPC6BQ86SZ2 158 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 TAS2R3Q9NYW6 316 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 OR6C3Q9NZP0 311 aa11.68□□□□□ -0.54
CBWD3-217ENST00000621474 UBE2QL1A1L167 161 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 MCRIP1C9JLW8 97 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 PAHP00439 452 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 MT-ND4P03905 459 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 GLAP06280 429 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 BLVRBP30043 206 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-217ENST00000621474 GLP1RP43220 463 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 UBE2E1P51965 193 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 BPIFB3P59826 476 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
CBWD3-217ENST00000621474 PLAC9Q5JTB6 97 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 NKAPLQ5M9Q1 402 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 NCR3LG1Q68D85 454 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 HEPN1Q6WQI6 88 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 MRGPRDQ8TDS7 321 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 AJUBAQ96IF1 538 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 URM1Q9BTM9 101 aaKnown RBP11.67□□□□□ -0.54
CBWD3-217ENST00000621474 MS4A7Q9GZW8 240 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-217ENST00000621474 LINC00574Q9H8X3 128 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 ETAA1Q9NY74 926 aa11.67□□□□□ -0.54
CBWD3-217ENST00000621474 FBN1P35555 2871 aaKnown RBP11.66□□□□□ -0.54
CBWD3-217ENST00000621474 A0A1W2PRD5 423 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 A0A1W2PRF3 423 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 A0A1W2PRM7 423 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 TMEM30CPA0ZSE6 113 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 ZNF729A6NN14 1252 aaPredicted RBP11.66□□□□□ -0.54
CBWD3-217ENST00000621474 NPIPB11E5RHQ5 1161 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 RAB27BO00194 218 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 SNRPBP14678 240 aaKnown RBP11.66□□□□□ -0.54
CBWD3-217ENST00000621474 RAB6AP20340 208 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 SSTR5P35346 364 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 VEGFCP49767 419 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 GUCA2AQ02747 115 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 RBM39Q14498 530 aaKnown RBP11.66□□□□□ -0.54
CBWD3-217ENST00000621474 PRAMEF5Q5TYX0 476 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 GPR107Q5VW38 600 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 ZNF565Q8N9K5 539 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 NEK7Q8TDX7 302 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 C17orf50Q8WW18 174 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 PTX4Q96A99 478 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 FAAP24Q9BTP7 215 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 GAL3ST2Q9H3Q3 398 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 PRDM13Q9H4Q3 707 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 ESM1Q9NQ30 184 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 RAB22AQ9UL26 194 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 KCNK7Q9Y2U2 307 aa11.66□□□□□ -0.54
CBWD3-217ENST00000621474 A0A0U1RQK1 487 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 KBTBD11-OT1A0A1B0GTJ5 212 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 hCG_1809904A0A1W2PP81 198 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 A0A1W2PPE2 198 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 A0A1W2PR64 198 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 A0A1W2PRV1 198 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 ODF3BA8MYP8 253 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 C15orf65H3BRN8 121 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 NPFFO15130 113 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 IL1AP01583 271 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 CDK2P24941 298 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 SAA4P35542 130 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 DEFB112Q30KQ8 113 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 LDLRAD2Q5SZI1 272 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 OLFML2AQ68BL7 652 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 USP43Q70EL4 1123 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 GPR141Q7Z602 305 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 SIGLECL1Q8N7X8 197 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 OR5H6Q8NGV6 325 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 OR4K15Q8NH41 348 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 MRPL30Q8TCC3 161 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms