RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SNX22Q96L94 193 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 TREM2Q9NZC2 230 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 HSF4Q9ULV5 492 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 ST3GAL6Q9Y274 331 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 DMRT1Q9Y5R6 373 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 HS3ST3B1Q9Y662 390 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 A0A087X0M5 115 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 A0A1B0GX30 115 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 E5RGE8 158 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 H7BYZ3 331 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 HMGB3O15347 200 aaKnown RBP6.06□□□□□ -1.44
NEDD9-216ENST00000620854 GATCO43716 136 aaKnown RBP6.06□□□□□ -1.44
NEDD9-216ENST00000620854 CYTIPO60759 359 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 IGLV3-19P01714 112 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 IGKV3-11P04433 115 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 HOXA5P20719 270 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 HNF1AP20823 631 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 CDX1P47902 265 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF133P52736 654 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-216ENST00000620854 LRP11Q86VZ4 500 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 FBXL14Q8N1E6 418 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 SLC25A45Q8N413 288 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF610Q8N9Z0 462 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 PPP1R35Q8TAP8 253 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 LHX4Q969G2 390 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 INTS12Q96CB8 462 aaKnown RBP6.06□□□□□ -1.44
NEDD9-216ENST00000620854 C14orf144Q96I85 54 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 NSG2Q9Y328 171 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 THADAQ6YHU6 1953 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 DOCK10Q96BY6 2186 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 RBFOX3A6NFN3 312 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 PPP5D1E7EU14 171 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 TSPAN2O60636 221 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BKO60814 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 NRASP01111 189 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BJP06899 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 PATE4P0C8F1 98 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 IRF2P14316 349 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BOP23527 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 MPZP25189 248 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BBP33778 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 PLA2G5P39877 138 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 CCL11P51671 97 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BDP58876 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BCP62807 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 SRPXP78539 464 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST2H2BEQ16778 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 KHDC3LQ587J8 217 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-216ENST00000620854 THEM4Q5T1C6 240 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HEPN1Q6WQI6 88 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BHQ93079 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 NTNG2Q96CW9 530 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BNQ99877 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HIST1H2BMQ99879 126 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 PILRBQ9UKJ0 227 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 RNF150Q9ULK6 438 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 ASPMQ8IZT6 3477 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 NOTCH3Q9UM47 2321 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 GEMIN2O14893 280 aaKnown RBP6.05□□□□□ -1.44
NEDD9-216ENST00000620854 ATP6V0CP27449 155 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 RNF4P78317 190 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 CATR1Q13166 79 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 DEGS2Q6QHC5 323 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 BAGE3Q86Y29 109 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 BAGE2Q86Y30 109 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 OR1N1Q8NGS0 311 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 LOXL4Q96JB6 756 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HDGFL3Q9Y3E1 203 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 PI4KAP42356 2102 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 A0A1W2PPQ1 181 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 RRP8O43159 456 aaKnown RBP6.05□□□□□ -1.44
NEDD9-216ENST00000620854 EFNA2O43921 213 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 SP9P0CG40 484 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 LYL1P12980 280 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 P2RY1P47900 373 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 FGF8P55075 233 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-216ENST00000620854 PIGYQ3MUY2 71 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 HES3Q5TGS1 186 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 KCNIP4Q6PIL6 250 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 TMEM178AQ8NBL3 297 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF439Q8NDP4 499 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 OR10J5Q8NHC4 309 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 ATG101Q9BSB4 218 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 CABLES2Q9BTV7 478 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 SCRT1Q9BWW7 348 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 CHST5Q9GZS9 411 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 PLEKHA2Q9HB19 425 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 ANXA10Q9UJ72 324 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 WNK2Q9Y3S1 2297 aa6.05□□□□□ -1.44
NEDD9-216ENST00000620854 NKX2-6A6NCS4 301 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 MPPED1O15442 326 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 DHHO43323 396 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 GAPDHP04406 335 aaKnown RBP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SEC11BP0C7V7 166 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 PGA4P0DJD7 388 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 PGA5P0DJD9 388 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 CCL4P13236 92 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SELLP14151 372 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms