RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 GZMHP20718 246 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 RCVRNP35243 200 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 GDNFP39905 211 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 GLIPR1P48060 266 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 DCTN2Q13561 401 aaKnown RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 ATXN7L3Q14CW9 347 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 CR1LQ2VPA4 569 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 KRBOX4Q5JUW0 171 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 TRIQKQ629K1 86 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 C16orf87Q6PH81 154 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 Q6ZS49 121 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 GDPD3Q7L5L3 318 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 TMEM229BQ8NBD8 167 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 TMEM185AQ8NFB2 350 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 OR4K15Q8NH41 348 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 ZFAND2BQ8WV99 257 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 NEIL1Q96FI4 390 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 BPESC1Q9GZL8 116 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 CHMP1AQ9HD42 196 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 PALMDQ9NP74 551 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 C12orf4Q9NQ89 552 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 MBNL3Q9NUK0 354 aaKnown RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 ING3Q9NXR8 418 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 CTSZQ9UBR2 303 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 SLC25A10Q9UBX3 287 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF230Q9UIE0 474 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 KIF25Q9UIL4 384 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 PCDHB10Q9UN67 800 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-209ENST00000620393 PTPN13Q12923 2485 aa6.66□□□□□ -1.34
CPNE3-209ENST00000620393 DYSFO75923 2080 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 UTP20O75691 2785 aaKnown RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 MEIKINA0A087WXM9 373 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 A0A1W2PQ09 198 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 ANKRD20A5PA0PJZ0 165 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 ODAMA1E959 279 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF736B4DX44 427 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 TRDCB7Z8K6 153 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 F5H0A9 414 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 PLA2G10O15496 165 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 FCN3O75636 299 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 FCER2P06734 321 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 RPS2P15880 293 aaKnown RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 NDUFB7P17568 137 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 RCC1P18754 421 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 INPP1P49441 399 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 NPY4RP50391 375 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 P2RX3P56373 397 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 EDDM3BP56851 147 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 AP3S2P59780 193 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 ACTBP60709 375 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 LMO4P61968 165 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 ACTG1P63261 375 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 MEF2CQ06413 473 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 DYRK1AQ13627 763 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 KLF9Q13886 244 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 EDDM3AQ14507 147 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 CLEC12BQ2HXU8 276 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 C11orf91Q3C1V1 193 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 WDR25Q64LD2 544 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 STEAP3Q658P3 488 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF57Q68EA5 555 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-209ENST00000620393 PRSS57Q6UWY2 283 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 Q6ZPA2 131 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 NLRC3Q7RTR2 1065 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 FGFRL1Q8N441 504 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 TOMM5Q8N4H5 51 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF565Q8N9K5 539 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 BEST4Q8NFU0 473 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 OR8B3Q8NGG8 313 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 CCDC107Q8WV48 283 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 DEDD2Q8WXF8 326 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 CORO2AQ92828 525 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 OR8B2Q96RD0 313 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 PIMREGQ9BSJ6 248 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 IFT46Q9NQC8 304 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 OR6C3Q9NZP0 311 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 ANXA10Q9UJ72 324 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 TRAPPC2LQ9UL33 140 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 MGAT4AQ9UM21 535 aa6.65□□□□□ -1.34
CPNE3-209ENST00000620393 LRBAP50851 2863 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CHD3Q12873 2000 aaKnown RBP6.64□□□□□ -1.35
CPNE3-209ENST00000620393 IGHV4-30-2A0A087WSY4 118 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 IGKV1D-8A0A087WSZ0 117 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 TRAV39A0A0B4J263 110 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 KIR2DS1A0A191URI9 304 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 LINC00854A0A1B0GVQ3 168 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 hADV38S2A0JD32 116 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 IGHV2-5P01817 119 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CD74P04233 296 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CD3DP04234 171 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CSF1P09603 554 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CTXN2P0C2S0 81 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 GSTT2P0CG29 244 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 AKAIN1P0CW23 69 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CGB3P0DN86 165 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CGB7P0DN87 165 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 SLC25A16P16260 332 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 TBPP20226 339 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms