RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	NKX2-1	P43699	371 aa	Predicted RBP	12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	CD81	P60033	236 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	C4orf17	Q53FE4	359 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	M1AP	Q8TC57	530 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	NAT6	Q93015	286 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	ZNF845	Q96IR2	970 aa	Predicted RBP	12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	C3orf85	A0A1B0GTC6	90 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	LOC102725191	A0A1B0GVB3	256 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	SYNGR3	O43761	229 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	PPY	P01298	95 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	RFPL3S	P0C7P2	107 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	OTX1	P32242	354 aa	Predicted RBP	12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	SLC23A3	Q6PIS1	610 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	TGIF2LX	Q8IUE1	241 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	OR13D1	Q8NGV5	346 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	TVP23C	Q96ET8	276 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	SLC7A10	Q9NS82	523 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	TMEM38B	Q9NVV0	291 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	PDCD6	O75340	191 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	CBR3	O75828	277 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	IL2RG	P31785	369 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	GLIPR1	P48060	266 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	USF2	Q15853	346 aa	Predicted RBP	12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	AKR1C8P	Q5T2L2	129 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	SNIP1	Q8TAD8	396 aa	Known RBP	12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	NIPSNAP3B	Q9BS92	247 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	SIRT7	Q9NRC8	400 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	FOXD3	Q9UJU5	478 aa	Predicted RBP	12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	COX6A1	P12074	109 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	RUNX1	Q01196	453 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	HNF4G	Q14541	408 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	PRR18	Q8N4B5	295 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	OR2C3	Q8N628	320 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	ANGPTL4	Q9BY76	406 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	PROK2	Q9HC23	129 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	SMCO3	A2RU48	225 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	ADAM20	O43506	726 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	PAX1	P15863	534 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	DTYMK	P23919	212 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	ATP6V0C	P27449	155 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	GDF1	P27539	372 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	GPM6A	P51674	278 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	IL13RA2	Q14627	380 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	TBC1D26	Q86UD7	250 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	TDH	Q8IZJ6	230 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	OR10D3	Q8NH80	312 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	MSI2	Q96DH6	328 aa	Known RBP	12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	HIST1H2BL	Q99880	126 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	SLC25A31	Q9H0C2	315 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	KIAA1456	Q9P272	454 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	IL36RN	Q9UBH0	155 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644		R4GN57	208 aa		12.47	□□□□□ -0.41
SMTN-223	ENST00000619644	PATE3	B3GLJ2	98 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	MPPED1	O15442	326 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	DKK1	O94907	266 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	SNRPC	P09234	159 aa	Known RBP	12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	FUT3	P21217	361 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	CRYGS	P22914	178 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	ICAM4	Q14773	271 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	DPPA2	Q7Z7J5	298 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	OR5C1	Q8NGR4	320 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	EXTL1	Q92935	676 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	FAM210B	Q96KR6	192 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	WSB1	Q9Y6I7	421 aa		12.46	□□□□□ -0.41
SMTN-223	ENST00000619644	LY6G6E	A0A0G2JKS1	128 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	GJE1	A6NN92	205 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	PHOX2A	O14813	284 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	TCAP	O15273	167 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	SCAF4	O95104	1147 aa	Known RBP	12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	FUT6	P51993	359 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	RAC3	P60763	192 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	EXT1	Q16394	746 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	LBH	Q53QV2	105 aa	Predicted RBP	12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	SNX22	Q96L94	193 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	HSF4	Q9ULV5	492 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644		U3KQA8	63 aa		12.46	□□□□□ -0.42
SMTN-223	ENST00000619644	TK1	P04183	234 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	SCT	P09683	121 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	OR5R1	Q8NH85	324 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	SAP25	Q8TEE9	199 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	IL1F10	Q8WWZ1	152 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	C10orf35	Q96D05	121 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	NEU1	Q99519	415 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	OR2H1	Q9GZK4	316 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	TP53TG5	Q9Y2B4	290 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	IGHV3-64D	A0A0J9YX35	117 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	MKRN2OS	H3BPM6	223 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	CA11	O75493	328 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	BCL3	P20749	454 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	FOLR3	P41439	243 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	OR56B2P	Q8NGI1	322 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	OR51H1	Q8NH63	302 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	UBALD1	Q8TB05	177 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	MOB3A	Q96BX8	217 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	BOD1	Q96IK1	185 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	WNT5B	Q9H1J7	359 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	DECR2	Q9NUI1	292 aa		12.45	□□□□□ -0.42
SMTN-223	ENST00000619644	HS3ST1	O14792	307 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms