RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CCL4P13236 92 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 VDAC1P21796 283 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 ELOBQ15370 118 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 ZNF506Q5JVG8 444 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 AKR1C8PQ5T2L2 129 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 Q8NFD4 153 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 ABHD3Q8WU67 409 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 GGACTQ9BVM4 153 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 TINAGQ9UJW2 476 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 WSB1Q9Y6I7 421 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 BAXQ07812 192 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 WIPI1Q5MNZ9 446 aaPredicted RBP17.49■□□□□ 0.39
NEK3-208ENST00000618534 RIPPLY2Q5TAB7 128 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 OR2V1Q8NHB1 315 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 IFI44Q8TCB0 444 aa17.49■□□□□ 0.39
NEK3-208ENST00000618534 A0A087WWC5 75 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 IGKV1-6A0A0C4DH72 117 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 SLC34A2O95436 690 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 HSPB1P04792 205 aaKnown RBP17.48■□□□□ 0.39
NEK3-208ENST00000618534 HAAOP46952 286 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 CXCL12P48061 93 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 CLDN15P56746 228 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 ERVFRD-1P60508 538 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 ZNF674Q2M3X9 581 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 LYSMD4Q5XG99 296 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 P4HA3Q7Z4N8 544 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 CLDND2Q8NHS1 167 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 ADGRG7Q96K78 797 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 BCL2L14Q9BZR8 327 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 DUXBA0A1W2PPF3 345 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A10PA6NDY2 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A18PA6NE21 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A16PA6NEW6 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A20PA6NIJ5 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A8PA6NJQ4 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A7PA6NKC0 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A22PA8MWA6 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A12PA8MX19 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A5PA8MXJ8 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A23PA8MXZ1 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 WRBO00258 174 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 TUSC2O75896 110 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 P04436 131 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A15PP0C7V4 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A13PP0C7W8 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A14PP0C7W9 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FAM90A24PP0C7X0 464 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 GPM6AP51674 278 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 PAX9P55771 341 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 NDUFA6P56556 154 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 RAB2AP61019 212 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 FOXO1Q12778 655 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 CMTM1Q8IZ96 169 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 OR2Y1Q8NGV0 311 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 ZNF845Q96IR2 970 aaPredicted RBP17.48■□□□□ 0.39
NEK3-208ENST00000618534 PRDM14Q9GZV8 571 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 TAAR3PQ9P1P4 343 aa17.48■□□□□ 0.39
NEK3-208ENST00000618534 TRAPPC6AO75865 159 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 CEACAM1P13688 526 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 FGF12P61328 243 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 RPS18P62269 152 aaKnown RBP17.47■□□□□ 0.39
NEK3-208ENST00000618534 PRDX4Q13162 271 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 HLA-BQ31612 363 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 NEK7Q8TDX7 302 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 TVP23CQ96ET8 276 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 ATP5SQ99766 215 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 RNF115Q9Y4L5 304 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 TGIF2-C20orf24A0A0A6YYL0 155 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 MMP9P14780 707 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 CCNOP22674 350 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 RPL23AP62750 156 aaKnown RBP17.47■□□□□ 0.39
NEK3-208ENST00000618534 NIPSNAP3BQ9BS92 247 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 UBE2ZQ9H832 354 aaPredicted RBP17.47■□□□□ 0.39
NEK3-208ENST00000618534 CALHM2Q9HA72 323 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 DOK5Q9P104 306 aa17.47■□□□□ 0.39
NEK3-208ENST00000618534 A0A0G2JRQ6 117 aa17.46■□□□□ 0.39
NEK3-208ENST00000618534 LRRC3CA6NJW4 275 aa17.46■□□□□ 0.39
NEK3-208ENST00000618534 H3BP45 60 aa17.46■□□□□ 0.39
NEK3-208ENST00000618534 RD3LP0DJH9 198 aa17.46■□□□□ 0.39
NEK3-208ENST00000618534 CDX1P47902 265 aaPredicted RBP17.46■□□□□ 0.39
NEK3-208ENST00000618534 TLE4Q04727 773 aa17.46■□□□□ 0.39
NEK3-208ENST00000618534 SRSF7Q16629 238 aaKnown RBP eCLIP17.46■□□□□ 0.39
NEK3-208ENST00000618534 OR5D13Q8NGL4 314 aa17.46■□□□□ 0.39
NEK3-208ENST00000618534 POM121Q96HA1 1249 aa17.46■□□□□ 0.39
NEK3-208ENST00000618534 SGCZQ96LD1 299 aa17.46■□□□□ 0.39
NEK3-208ENST00000618534 CCL2P13500 99 aa17.46■□□□□ 0.38
NEK3-208ENST00000618534 TAS2R30P59541 319 aa17.46■□□□□ 0.38
NEK3-208ENST00000618534 COLCA1Q6ZS62 124 aa17.46■□□□□ 0.38
NEK3-208ENST00000618534 ZNF610Q8N9Z0 462 aa17.46■□□□□ 0.38
NEK3-208ENST00000618534 RBMXL1Q96E39 390 aaKnown RBP17.46■□□□□ 0.38
NEK3-208ENST00000618534 TCFL5Q9UL49 500 aa17.46■□□□□ 0.38
NEK3-208ENST00000618534 H0Y980 276 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 PGLYRP1O75594 196 aaPredicted RBP17.45■□□□□ 0.38
NEK3-208ENST00000618534 IL24Q13007 206 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 MTCH1Q9NZJ7 389 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 KIR2DS1A0A191URI9 304 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 KIR2DS4P43632 304 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 KIR2DS1Q14954 304 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 PYY3Q5JQD4 70 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 C9orf135Q5VTT2 229 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms