RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 PRB2P02812 416 aaPredicted RBP15.25■□□□□ 0.03
CDX1-202ENST00000616154 CSN2P05814 226 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 CD2P06729 351 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 IGHV1-8P0DP01 117 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 OR3A1P47881 315 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 DYNLT3P51808 116 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 EDDM3BP56851 147 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 GRK1Q15835 563 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 SSX2Q16385 188 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 CTF1Q16619 201 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 NSUN5P1Q3KNT7 163 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 CEACAM19Q7Z692 300 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 TMEM219Q86XT9 240 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 NDUFA11Q86Y39 141 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 CHST4Q8NCG5 386 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 CPNE2Q96FN4 548 aaPredicted RBP15.25■□□□□ 0.03
CDX1-202ENST00000616154 PRSS22Q9GZN4 317 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 TXNL4BQ9NX01 149 aaKnown RBP15.25■□□□□ 0.03
CDX1-202ENST00000616154 CEPT1Q9Y6K0 416 aa15.25■□□□□ 0.03
CDX1-202ENST00000616154 AIREO43918 545 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 OR2H2O95918 312 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 ALDOBP05062 364 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 IGFBP3P17936 291 aaPredicted RBP15.24■□□□□ 0.03
CDX1-202ENST00000616154 RAB3AP20336 220 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 DUSP1P28562 367 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 SOX2P48431 317 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 TMBIM6P55061 237 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 P2RX3P56373 397 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 FAM27D1Q5T7N8 215 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 GPR107Q5VW38 600 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 Q6P435 159 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 ASCL4Q6XD76 172 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 OR51A2Q8NGJ7 313 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 OR5D18Q8NGL1 313 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 ZNF714Q96N38 554 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 WNT10AQ9GZT5 417 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 NAA50Q9GZZ1 169 aaKnown RBP15.24■□□□□ 0.03
CDX1-202ENST00000616154 EXOSC4Q9NPD3 245 aaKnown RBP15.24■□□□□ 0.03
CDX1-202ENST00000616154 SSR3Q9UNL2 185 aa15.24■□□□□ 0.03
CDX1-202ENST00000616154 SMIM31A0A1B0GVY4 71 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 MEX3AA1L020 520 aaKnown RBP15.23■□□□□ 0.03
CDX1-202ENST00000616154 DPPA5A6NC42 116 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 ADARB2-AS1A8MUL3 147 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 SH2D1BO14796 132 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 ARL6IP5O75915 188 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 HCKP08631 526 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 GABRR1P24046 479 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 MTNR1BP49286 362 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 OR4F17Q8NGA8 305 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 OR4F4Q96R69 305 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 CHCHD6Q9BRQ6 235 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 CENPOQ9BU64 300 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 MMP28Q9H239 520 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 GSTK1Q9Y2Q3 226 aa15.23■□□□□ 0.03
CDX1-202ENST00000616154 TRAV1-2A0A0B4J238 106 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 A6NHS1 94 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 ZNF701M0R085 212 aaPredicted RBP15.22■□□□□ 0.03
CDX1-202ENST00000616154 CD37P11049 281 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 DYNC1I2Q13409 638 aaKnown RBP15.22■□□□□ 0.03
CDX1-202ENST00000616154 EDDM3AQ14507 147 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 OXLD1Q5BKU9 147 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 MINOS1Q5TGZ0 78 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 CLVS1Q8IUQ0 354 aaPredicted RBP15.22■□□□□ 0.03
CDX1-202ENST00000616154 OR51T1Q8NGJ9 327 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 RAB2BQ8WUD1 216 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 CORO2AQ92828 525 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 R3HDM4Q96D70 268 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 CITED2Q99967 270 aaPredicted RBP15.22■□□□□ 0.03
CDX1-202ENST00000616154 CHST6Q9GZX3 395 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 BATF3Q9NR55 127 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 TAS2R4Q9NYW5 299 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 NDUFA13Q9P0J0 144 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 UBE2J1Q9Y385 318 aaPredicted RBP15.22■□□□□ 0.03
CDX1-202ENST00000616154 MINOS1-NBL1R4GNA1 71 aa15.22■□□□□ 0.03
CDX1-202ENST00000616154 TRAV8-7A0A075B6U6 113 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 F2RL2O00254 374 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 PEX14O75381 377 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 TMEM225BP0DP42 221 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 CALCBP10092 127 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 PAX5Q02548 391 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 HSD17B12Q53GQ0 312 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 C22orf42Q6IC83 251 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 TPRX1Q8N7U7 411 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 TMEM138Q9NPI0 162 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 NECAP2Q9NVZ3 263 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 IL36GQ9NZH8 169 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 SESN1Q9Y6P5 492 aa15.21■□□□□ 0.03
CDX1-202ENST00000616154 SHISA3A0PJX4 238 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 FUOMA2VDF0 154 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 SIRPB1O00241 398 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 SLC33A1O00400 549 aaPredicted RBP15.2■□□□□ 0.02
CDX1-202ENST00000616154 SRMP19623 302 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 BLCAPP62952 87 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 IL13RA2Q14627 380 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 NHLRC3Q5JS37 347 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 Q6ZS46 218 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 LRRTM1Q86UE6 522 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 LYPD6Q86Y78 171 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 ISOC1Q96CN7 298 aa15.2■□□□□ 0.02
CDX1-202ENST00000616154 ORAI1Q96D31 301 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms