RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 SFTA3P0C7M3 94 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 NQO2P16083 231 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 RPS4Y1P22090 263 aaKnown RBP17.63■□□□□ 0.41
CTDP1-208ENST00000613122 SCN4AP35499 1836 aa17.63■□□□□ 0.41
CTDP1-208ENST00000613122 COL11A2P13942 1736 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-208ENST00000613122 TSPAN2O60636 221 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 RBPMS2Q6ZRY4 209 aaKnown RBP17.62■□□□□ 0.41
CTDP1-208ENST00000613122 ZBTB34Q8NCN2 500 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 LILRB1Q8NHL6 650 aaPredicted RBP17.62■□□□□ 0.41
CTDP1-208ENST00000613122 IGKV1-8A0A0C4DH67 115 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 CSF2RBP32927 897 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 RAG2P55895 527 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 SHISA5Q8N114 240 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 TMEM18Q96B42 140 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 TNS1Q9HBL0 1735 aaKnown RBP17.62■□□□□ 0.41
CTDP1-208ENST00000613122 SYNGR1O43759 233 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 Q1RN00 199 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 ZNF714Q96N38 554 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 TMEM167BQ9NRX6 74 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 OR2W1Q9Y3N9 320 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 PTTG1IPP53801 180 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 TEX30Q5JUR7 227 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 SLC6A1P30531 599 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 ZNF519Q8TB69 540 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 HS3ST3B1Q9Y662 390 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 ATG2BQ96BY7 2078 aa17.62■□□□□ 0.41
CTDP1-208ENST00000613122 CACNA1CQ13936 2221 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 CPN1P15169 458 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 MMP16P51512 607 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 TPPP2P59282 170 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 PSG4Q00888 419 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 TMEM74BQ9NUR3 256 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 RABAC1Q9UI14 185 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 TRAPPC1Q9Y5R8 145 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 TRBV5-3A0A0A0MS03 114 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 CSRP2Q16527 193 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 PIMREGQ9BSJ6 248 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 WSB1Q9Y6I7 421 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 SUMO1P63165 101 aaKnown RBP17.61■□□□□ 0.41
CTDP1-208ENST00000613122 CCL13Q99616 98 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 MMP24Q9Y5R2 645 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 TRAV39A0A0B4J263 110 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 HTN1P15515 57 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 DYNLT3P51808 116 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 TMEM241Q24JQ0 296 aa17.61■□□□□ 0.41
CTDP1-208ENST00000613122 TRIP12Q14669 1992 aaPredicted RBP17.61■□□□□ 0.41
CTDP1-208ENST00000613122 ASCC3Q8N3C0 2202 aaKnown RBP17.61■□□□□ 0.41
CTDP1-208ENST00000613122 DAOP14920 347 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 OR8I2Q8N0Y5 310 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 FAM181AQ8N9Y4 354 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 OR2V2Q96R30 315 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 CHODLQ9H9P2 273 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 SLC7A10Q9NS82 523 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 ICMTO60725 284 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 KLRB1Q12918 225 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 REG1BP48304 166 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 KRTDAPP60985 99 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 RPL30P62888 115 aaKnown RBP17.6■□□□□ 0.41
CTDP1-208ENST00000613122 LSM11P83369 360 aaKnown RBP eCLIP17.6■□□□□ 0.41
CTDP1-208ENST00000613122 FAM219AQ8IW50 185 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 OR1L8Q8NGR8 309 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 CENPVL1A0A0U1RR11 272 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 APELAP0DMC3 54 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 HLA-GP17693 338 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 SLC25A42Q86VD7 318 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 ERGP11308 486 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 DGAT2L7PQ6IED9 249 aa17.6■□□□□ 0.41
CTDP1-208ENST00000613122 GREM1O60565 184 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 IL11P20809 199 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 HTR1DP28221 377 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 MMP26Q9NRE1 261 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 FBXL17Q9UF56 701 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 POLR2AP24928 1970 aaKnown RBP17.59■□□□□ 0.41
CTDP1-208ENST00000613122 DXOO77932 396 aaKnown RBP17.59■□□□□ 0.41
CTDP1-208ENST00000613122 CLDN14O95500 239 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 VDAC1P21796 283 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 UFC1Q9Y3C8 167 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 TO15178 435 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 ATP1A1-AS1Q5TC04 95 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 WFDC3Q8IUB2 231 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 PRSS50Q9UI38 385 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 A0A1W2PQM1 296 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 K7N7A8 449 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 CTDSPLO15194 276 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 RSPO4Q2I0M5 234 aaPredicted RBP17.59■□□□□ 0.41
CTDP1-208ENST00000613122 CLEC18BQ6UXF7 455 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 A0A1W2PPE3 182 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 COX6A1P12074 109 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 G6PCP35575 357 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 ID1P41134 155 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 P2RY1P47900 373 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 ZNF488Q96MN9 340 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 NAT8BQ9UHF3 227 aa17.59■□□□□ 0.41
CTDP1-208ENST00000613122 SPAG17Q6Q759 2223 aa17.58■□□□□ 0.41
CTDP1-208ENST00000613122 SPINK4O60575 86 aa17.58■□□□□ 0.4
CTDP1-208ENST00000613122 RPEL1Q2QD12 228 aa17.58■□□□□ 0.4
CTDP1-208ENST00000613122 UQCC3Q6UW78 93 aa17.58■□□□□ 0.4
CTDP1-208ENST00000613122 ADAT3Q96EY9 351 aaPredicted RBP17.58■□□□□ 0.4
CTDP1-208ENST00000613122 ABHD1Q96SE0 405 aa17.58■□□□□ 0.4
CTDP1-208ENST00000613122 VSIG4Q9Y279 399 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms