RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.51	□□□□□ -0.25
CCND3-222	ENST00000612455	MGLL	Q99685	303 aa		13.51	□□□□□ -0.25
CCND3-222	ENST00000612455	CCDC90B	Q9GZT6	254 aa		13.51	□□□□□ -0.25
CCND3-222	ENST00000612455	TCF7L1	Q9HCS4	588 aa		13.51	□□□□□ -0.25
CCND3-222	ENST00000612455	GHRL	Q9UBU3	117 aa		13.51	□□□□□ -0.25
CCND3-222	ENST00000612455	BLOC1S6	Q9UL45	172 aa		13.51	□□□□□ -0.25
CCND3-222	ENST00000612455	MEIKIN	A0A087WXM9	373 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A10P	A6NDY2	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A18P	A6NE21	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A16P	A6NEW6	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A20P	A6NIJ5	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A7P	A6NKC0	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A22P	A8MWA6	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A12P	A8MX19	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A5P	A8MXJ8	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A23P	A8MXZ1	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	NPIPB11	E5RHQ5	1161 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	HSPB6	O14558	160 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	MRPS14	O60783	128 aa	Known RBP	13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A15P	P0C7V4	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A13P	P0C7W8	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A14P	P0C7W9	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM90A24P	P0C7X0	464 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	DYNLT3	P51808	116 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	DYNC1I2	Q13409	638 aa	Known RBP	13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	TRAM1	Q15629	374 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	TBCE	Q15813	527 aa	Predicted RBP	13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	OLFML2A	Q68BL7	652 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	AWAT2	Q6E213	333 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	OR4P4	Q8NGL7	312 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	LINC01006	Q8NI28	216 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	ING3	Q9NXR8	418 aa		13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	RCC2	Q9P258	522 aa	Known RBP	13.5	□□□□□ -0.25
CCND3-222	ENST00000612455	HSMCR30	P0CW71	290 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	PSMA1	P25786	263 aa	Known RBP	13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	RPS25	P62851	125 aa	Known RBP	13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	SSX2	Q16385	188 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	HSD17B12	Q53GQ0	312 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	GLT8D1	Q68CQ7	371 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	TMEM104	Q8NE00	496 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	TMEM203	Q969S6	136 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	KIRREL1	Q96J84	757 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	SPACA1	Q9HBV2	294 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	ACOT13	Q9NPJ3	140 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	CALY	Q9NYX4	217 aa		13.49	□□□□□ -0.25
CCND3-222	ENST00000612455	MT-ND4	P03905	459 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	GLA	P06280	429 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	UBB	P0CG47	229 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	MGMT	P16455	207 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	GZMH	P20718	246 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	HTR1D	P28221	377 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	GABARAPL2	P60520	117 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	EMX1	Q04741	257 aa	Predicted RBP	13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	UTF1	Q5T230	341 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	ATAD3C	Q5T2N8	411 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	SIGIRR	Q6IA17	410 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	BRICD5	Q6PL45	260 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	GAPT	Q8N292	157 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	OR10A7	Q8NGE5	316 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	ZNF596	Q8TC21	504 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455		Q96M66	194 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	BANF2	Q9H503	90 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	ZNF286A	Q9HBT8	521 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	DPM3	Q9P2X0	92 aa		13.48	□□□□□ -0.25
CCND3-222	ENST00000612455	LY6L	H3BQJ8	138 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	IL1A	P01583	271 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	GLP1R	P43220	463 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	RAB13	P51153	203 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	PROK1	P58294	105 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	FAM189A2	Q15884	450 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	LY6E	Q16553	131 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	ZNF497	Q6ZNH5	498 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	LIAT1	Q6ZQX7	453 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	SLC16A12	Q6ZSM3	486 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	ZNF367	Q7RTV3	350 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	SGMS2	Q8NHU3	365 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	GFI1	Q99684	422 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	SELENOI	Q9C0D9	397 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455		Q9H521	79 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	IDI2-AS1	Q9NZ38	188 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	RNF114	Q9Y508	228 aa		13.47	□□□□□ -0.25
CCND3-222	ENST00000612455	TRAV39	A0A0B4J263	110 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	TMEM30CP	A0ZSE6	113 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455		A6NDX4	124 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	MCRIP1	C9JLW8	97 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	SLC22A1	O15245	554 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	CRTAP	O75718	401 aa	Predicted RBP	13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	VSIG8	P0DPA2	414 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	FUT3	P21217	361 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	GABRA5	P31644	462 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	KIR2DS4	P43632	304 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	PRRX1	P54821	245 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	FABP5	Q01469	135 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	RBM39	Q14498	530 aa	Known RBP	13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	SSX1	Q16384	188 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	HLA-DRB5	Q30154	266 aa		13.46	□□□□□ -0.25
CCND3-222	ENST00000612455	MRGPRD	Q8TDS7	321 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms