RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 MRPL24Q96A35 216 aaKnown RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 MRPL13Q9BYD1 178 aaKnown RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RAB1BQ9H0U4 201 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 OPN4Q9UHM6 478 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 VSIG4Q9Y279 399 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 FAM96BQ9Y3D0 163 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 A0A1W2PPE3 182 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RPL36A-HNRNPH2H7BZ11 118 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 SCAF4O95104 1147 aaKnown RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CLPSP04118 112 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 FCGR3AP08637 254 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 PRF1P14222 555 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CBR1P16152 277 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 DTYMKP23919 212 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RPS11P62280 158 aaKnown RBP eCLIP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 TMEM267Q0VDI3 215 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 SLC25A53Q5H9E4 307 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 C19orf48Q6RUI8 117 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 LYZL2Q7Z4W2 148 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 SLC25A42Q86VD7 318 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 KLF14Q8TD94 323 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 SSX3Q99909 188 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 ZNF251Q9BRH9 671 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 SEMA5BQ9P283 1151 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RPS10-NUDT3A0A1W2PQS6 291 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 A8MXE2 369 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 OR5G3P0C626 314 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 METTL15P1P0C7V9 234 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CD37P11049 281 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CPN1P15169 458 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 GZMHP20718 246 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RPS10P46783 165 aaKnown RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CEBPDP49716 269 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 MRPS11P82912 194 aaKnown RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 SURF2Q15527 256 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 IL34Q6ZMJ4 242 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 C1QL2Q7Z5L3 287 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 OR5C1Q8NGR4 320 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 ITLN1Q8WWA0 313 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RAB1CQ92928 201 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RPEQ96AT9 228 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 NIPSNAP3BQ9BS92 247 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CLDN16Q9Y5I7 305 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 UBE2L5PA0A1B0GUS4 154 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 ATXN7O15265 892 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 PRDX2P32119 198 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 PPP1CCP36873 323 aaKnown RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 PSMB3P49720 205 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 FGF12P61328 243 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 FAM27E3Q08E93 113 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 SRSF6Q13247 344 aaKnown RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 Q6ZT83 130 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 NR2C2APQ86WQ0 139 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 NANPQ8TBE9 248 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 PRDM14Q9GZV8 571 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 GAL3ST2Q9H3Q3 398 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 CA10Q9NS85 328 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 PCNTO95613 3336 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 HELZP42694 1942 aaKnown RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 PTPRQQ9UMZ3 2332 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 OOEPA6NGQ2 149 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 LRRC3CA6NJW4 275 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 NCBP2LA6PVI3 153 aaKnown RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 SOX15O60248 233 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 CRHP06850 196 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 HOXD4P09016 255 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 SCTP09683 121 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 VSIG10L2P0DP72 767 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 ACKR3P25106 362 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 HLA-DRB3P79483 266 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 MPPED2Q15777 294 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 RPUSD3Q6P087 351 aaKnown RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 FAHD2BQ6P2I3 314 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 FAM122CQ6P4D5 195 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 SEZ6L2Q6UXD5 910 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 OR2C3Q8N628 320 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 ASB13Q8WXK3 278 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 FAHD2AQ96GK7 314 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 ACY3Q96HD9 319 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 UHRF2Q96PU4 802 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 GPHA2Q96T91 129 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 UBTD1Q9HAC8 227 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 ZGRF1Q86YA3 2104 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 HRASP01112 189 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 RCC1P18754 421 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 LHX2P50458 406 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 CLDN18P56856 261 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 ADIRFQ15847 76 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 PRSS54Q6PEW0 395 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 LIAT1Q6ZQX7 453 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 MALSU1Q96EH3 234 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 CCL13Q99616 98 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 RNF122Q9H9V4 155 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 KCNIP2Q9NS61 270 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 IL36GQ9NZH8 169 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 ZNF107Q9UII5 783 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-218ENST00000610726 OR2W1Q9Y3N9 320 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 URGCP-MRPS24S4R325 110 aa6.28□□□□□ -1.4
CSDE1-218ENST00000610726 A0A0G2JK05 382 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms