RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 PRAMEF20Q5VT98 475 aa19.24■□□□□ 0.67
SHANK2-220ENST00000608988 ABHD5Q8WTS1 349 aa19.24■□□□□ 0.67
SHANK2-220ENST00000608988 FRZBQ92765 325 aa19.24■□□□□ 0.67
SHANK2-220ENST00000608988 OR6C1Q96RD1 312 aa19.24■□□□□ 0.67
SHANK2-220ENST00000608988 UCN2Q96RP3 112 aa19.24■□□□□ 0.67
SHANK2-220ENST00000608988 MYO7BQ6PIF6 2116 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 LAMA3Q16787 3333 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 PHOX2AO14813 284 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 OR7C1O76099 320 aaPredicted RBP19.23■□□□□ 0.67
SHANK2-220ENST00000608988 DDTP30046 118 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 PAX9P55771 341 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 RUNX1Q01196 453 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 RAET1LQ5VY80 246 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 ZNF818PQ6ZRF7 136 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 GAPTQ8N292 157 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 SPSB4Q96A44 273 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 CEP290O15078 2479 aa19.23■□□□□ 0.67
SHANK2-220ENST00000608988 IGHV3-15A0A0B4J1V0 119 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 ZIC3O60481 467 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 TIAF1O95411 115 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 IFNA1P01562 189 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 ZNF154Q13106 437 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 SSX9Q7RTT3 188 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 SLC25A45Q8N413 288 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 RNASEH2CQ8TDP1 164 aaKnown RBP19.22■□□□□ 0.67
SHANK2-220ENST00000608988 RIMS4Q9H426 269 aaPredicted RBP19.22■□□□□ 0.67
SHANK2-220ENST00000608988 CDH20Q9HBT6 801 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 SDF2L1Q9HCN8 221 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 SMCO3A2RU48 225 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 SLC22A20A6NK97 555 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 MKRN2OSH3BPM6 223 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 DVL1O14640 695 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 LTBRP36941 435 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 ZNF92Q03936 586 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 COL19A1Q14993 1142 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 CDPF1Q6NVV7 123 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 TMEM217Q8N7C4 229 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 SCGB1C1Q8TD33 95 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 PARD6GQ9BYG4 376 aaPredicted RBP19.22■□□□□ 0.67
SHANK2-220ENST00000608988 RYDENQ9NUL5 291 aaKnown RBP19.22■□□□□ 0.67
SHANK2-220ENST00000608988 GNG13Q9P2W3 67 aa19.22■□□□□ 0.67
SHANK2-220ENST00000608988 LOC102723996A0A087X1L8 192 aa19.21■□□□□ 0.67
SHANK2-220ENST00000608988 LRP5LA4QPB2 252 aa19.21■□□□□ 0.67
SHANK2-220ENST00000608988 CCDC85CA6NKD9 419 aa19.21■□□□□ 0.67
SHANK2-220ENST00000608988 ZNF32P17041 273 aa19.21■□□□□ 0.67
SHANK2-220ENST00000608988 RAB11AP62491 216 aa19.21■□□□□ 0.67
SHANK2-220ENST00000608988 GAMTQ14353 236 aa19.21■□□□□ 0.67
SHANK2-220ENST00000608988 DAZAP2Q15038 168 aaPredicted RBP19.21■□□□□ 0.67
SHANK2-220ENST00000608988 RSPO4Q2I0M5 234 aaPredicted RBP19.21■□□□□ 0.67
SHANK2-220ENST00000608988 ZNF611Q8N823 705 aa19.21■□□□□ 0.67
SHANK2-220ENST00000608988 PACRGQ96M98 296 aaPredicted RBP19.21■□□□□ 0.67
SHANK2-220ENST00000608988 RAC3P60763 192 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 MPV17LQ2QL34 196 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 ZNF787Q6DD87 383 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 SLC25A24Q6NUK1 477 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 THNSL2Q86YJ6 484 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 PIGCQ92535 297 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 ZNF837Q96EG3 531 aaPredicted RBP19.2■□□□□ 0.66
SHANK2-220ENST00000608988 AGMATQ9BSE5 352 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 OR2H1Q9GZK4 316 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 TAAR3PQ9P1P4 343 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 VAX2Q9UIW0 290 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 KNL1Q8NG31 2342 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 A0A0J9YW62 118 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 FABP4P15090 132 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 SERF2P84101 59 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 PCOLCEQ15113 449 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 Q3ZCU0 254 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 RIPPLY2Q5TAB7 128 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 GFI1BQ5VTD9 330 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 MRGPRGQ86SM5 289 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 WNT5BQ9H1J7 359 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 WDR54Q9H977 334 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 P4HTMQ9NXG6 502 aa19.2■□□□□ 0.66
SHANK2-220ENST00000608988 SLC31A2O15432 143 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 FGF12P61328 243 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 PSG4Q00888 419 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 SLC25A26Q70HW3 274 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 TMEM183AQ8IXX5 376 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 CA5BP1Q8WTZ4 195 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 HIST1H2BLQ99880 126 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 PRDM14Q9GZV8 571 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 SRD5A3Q9H8P0 318 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 CRLF2Q9HC73 371 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 ATP23Q9Y6H3 246 aa19.19■□□□□ 0.66
SHANK2-220ENST00000608988 CNOT4O95628 575 aaKnown RBP19.18■□□□□ 0.66
SHANK2-220ENST00000608988 LY86O95711 162 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 MRPL14Q6P1L8 145 aaKnown RBP19.18■□□□□ 0.66
SHANK2-220ENST00000608988 P4HA3Q7Z4N8 544 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 OR10A7Q8NGE5 316 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 PINX1Q96BK5 328 aaKnown RBP19.18■□□□□ 0.66
SHANK2-220ENST00000608988 CABLES2Q9BTV7 478 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 C1QTNF5Q9BXJ0 243 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 SH2D2AQ9NP31 389 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 ARID1AO14497 2285 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 A0A087X0M5 115 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 TRBV6-6A0A0A6YYG2 114 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 A0A1B0GX30 115 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 TNFSF11O14788 317 aa19.18■□□□□ 0.66
SHANK2-220ENST00000608988 PGLYRP1O75594 196 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms