RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZBTB25P24278 435 aa18.11■□□□□ 0.49
USP6NL-204ENST00000606752 BAMBIQ13145 260 aa18.11■□□□□ 0.49
USP6NL-204ENST00000606752 SPICQ8N5J4 248 aa18.11■□□□□ 0.49
USP6NL-204ENST00000606752 DMRTB1Q96MA1 342 aa18.11■□□□□ 0.49
USP6NL-204ENST00000606752 RTBDNQ9BSG5 229 aaPredicted RBP18.11■□□□□ 0.49
USP6NL-204ENST00000606752 DYNLRB1Q9NP97 96 aa18.11■□□□□ 0.49
USP6NL-204ENST00000606752 TRAPPC2LQ9UL33 140 aa18.11■□□□□ 0.49
USP6NL-204ENST00000606752 TFF1P04155 84 aa18.1■□□□□ 0.49
USP6NL-204ENST00000606752 PGAM2P15259 253 aa18.1■□□□□ 0.49
USP6NL-204ENST00000606752 UBE2MP61081 183 aaKnown RBP18.1■□□□□ 0.49
USP6NL-204ENST00000606752 SEC61A1P61619 476 aaKnown RBP18.1■□□□□ 0.49
USP6NL-204ENST00000606752 PPP1R1AQ13522 171 aa18.1■□□□□ 0.49
USP6NL-204ENST00000606752 TMEM128Q5BJH2 165 aa18.1■□□□□ 0.49
USP6NL-204ENST00000606752 SLC35E4Q6ICL7 350 aa18.1■□□□□ 0.49
USP6NL-204ENST00000606752 LYG2Q86SG7 212 aa18.1■□□□□ 0.49
USP6NL-204ENST00000606752 FAM222BQ8WU58 562 aa18.1■□□□□ 0.49
USP6NL-204ENST00000606752 METRNQ9UJH8 293 aa18.1■□□□□ 0.49
USP6NL-204ENST00000606752 MEIKINA0A087WXM9 373 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 TMEM30CPA0ZSE6 113 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 C9orf170A2RU37 121 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 ZNF205O95201 554 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 HLA-AP01891 365 aaKnown RBP18.09■□□□□ 0.49
USP6NL-204ENST00000606752 TK1P04183 234 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 ANXA3P12429 323 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 IRF2P14316 349 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 OR3A1P47881 315 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 IL13RA1P78552 427 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 HLA-DRB3P79483 266 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 DHODHQ02127 395 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 ZFP69Q49AA0 526 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 C5orf24Q7Z6I8 188 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 OR4A4PQ8NGN8 299 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 SAP30LQ9HAJ7 183 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 MBNL3Q9NUK0 354 aaKnown RBP18.09■□□□□ 0.49
USP6NL-204ENST00000606752 HCFC1P51610 2035 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 IGHV3OR15-7A0A075B7D8 119 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 PI3P19957 117 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 HERPUD1Q15011 391 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 C12orf45Q8N5I9 185 aaPredicted RBP18.09■□□□□ 0.49
USP6NL-204ENST00000606752 ASCC1Q8N9N2 400 aaKnown RBP18.09■□□□□ 0.49
USP6NL-204ENST00000606752 ZFAND1Q8TCF1 268 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 SHARPINQ9H0F6 387 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 MGAT4CQ9UBM8 478 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 PCDHB10Q9UN67 800 aa18.09■□□□□ 0.49
USP6NL-204ENST00000606752 C14orf166Q9Y224 244 aaKnown RBP18.09■□□□□ 0.49
USP6NL-204ENST00000606752 CACNA1DQ01668 2161 aa18.08■□□□□ 0.49
USP6NL-204ENST00000606752 B8ZZF3 427 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 BET1O15155 118 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 CYB5R3P00387 301 aaPredicted RBP18.08■□□□□ 0.48
USP6NL-204ENST00000606752 NFYAP23511 347 aaPredicted RBP18.08■□□□□ 0.48
USP6NL-204ENST00000606752 SWI5Q1ZZU3 235 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 FAM201AQ5SY85 155 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 MUC15Q8N387 334 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 UXS1Q8NBZ7 420 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 OR2AK2Q8NG84 335 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 ANGPTL6Q8NI99 470 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 TMEM230Q96A57 120 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 MOB3AQ96BX8 217 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 SLC23A1Q9UHI7 598 aa18.08■□□□□ 0.48
USP6NL-204ENST00000606752 SPTBN1Q01082 2364 aaKnown RBP18.08■□□□□ 0.48
USP6NL-204ENST00000606752 IGKV1-6A0A0C4DH72 117 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 LRRC30A6NM36 301 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 ZNF737O75373 536 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 CTSDP07339 412 aaPredicted RBP18.07■□□□□ 0.48
USP6NL-204ENST00000606752 ZNF728P0DKX0 622 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 CD80P33681 288 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 GABRA2P47869 451 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 UCP3P55916 312 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 AESQ08117 197 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 PPP1R35Q8TAP8 253 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 COQ2Q96H96 371 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 ZNF436Q9C0F3 470 aaPredicted RBP18.07■□□□□ 0.48
USP6NL-204ENST00000606752 PKDREJQ9NTG1 2253 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 SMG1Q96Q15 3661 aaKnown RBP18.07■□□□□ 0.48
USP6NL-204ENST00000606752 TRAV39A0A0B4J263 110 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 PPYP01298 95 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 AADACP22760 399 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 VAMP1P23763 118 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 PAX5Q02548 391 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 TGIF2LYQ8IUE0 185 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 SNX22Q96L94 193 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 BBC3Q96PG8 261 aaPredicted RBP18.07■□□□□ 0.48
USP6NL-204ENST00000606752 CABLES2Q9BTV7 478 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 FXYD6Q9H0Q3 95 aa18.07■□□□□ 0.48
USP6NL-204ENST00000606752 DUS4LO95620 317 aaKnown RBP18.06■□□□□ 0.48
USP6NL-204ENST00000606752 DIRAS3O95661 229 aa18.06■□□□□ 0.48
USP6NL-204ENST00000606752 MUC1P15941 1255 aaPredicted RBP18.06■□□□□ 0.48
USP6NL-204ENST00000606752 FXYD4P59646 89 aa18.06■□□□□ 0.48
USP6NL-204ENST00000606752 HERV-K104P61576 105 aa18.06■□□□□ 0.48
USP6NL-204ENST00000606752 KRBOX4Q5JUW0 171 aa18.06■□□□□ 0.48
USP6NL-204ENST00000606752 MITD1Q8WV92 249 aa18.06■□□□□ 0.48
USP6NL-204ENST00000606752 TOMM40LQ969M1 308 aa18.06■□□□□ 0.48
USP6NL-204ENST00000606752 KIF25Q9UIL4 384 aa18.06■□□□□ 0.48
USP6NL-204ENST00000606752 CD34P28906 385 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 HMGN3Q15651 99 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 TEX36Q5VZQ5 186 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 CLEC4MQ9H2X3 399 aaPredicted RBP18.05■□□□□ 0.48
USP6NL-204ENST00000606752 KCNIP1Q9NZI2 227 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 TRBV6-7A0A0A0MS04 114 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 FAM172BPA6NC97 362 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms