RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZNF418Q8TF45 676 aaPredicted RBP11.69□□□□□ -0.54
CTSA-211ENST00000606066 PTX4Q96A99 478 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 LPAR5Q9H1C0 372 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 KCNK15Q9H427 330 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 ETAA1Q9NY74 926 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 ZNF581Q9P0T4 197 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 ZNF69Q9UC07 566 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 SCOCQ9UIL1 159 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 KIF25Q9UIL4 384 aa11.69□□□□□ -0.54
CTSA-211ENST00000606066 ARHGAP32A7KAX9 2087 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 TMEM272A0A1B0GTI8 110 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
CTSA-211ENST00000606066 METTL21EPA6NDL7 271 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 ZNF729A6NN14 1252 aaPredicted RBP11.68□□□□□ -0.54
CTSA-211ENST00000606066 IL1AP01583 271 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 IGHV1-8P0DP01 117 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 SLC2A2P11168 524 aaPredicted RBP11.68□□□□□ -0.54
CTSA-211ENST00000606066 RAB6AP20340 208 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 GZMHP20718 246 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 BLVRBP30043 206 aaPredicted RBP11.68□□□□□ -0.54
CTSA-211ENST00000606066 RPL5P46777 297 aaKnown RBP11.68□□□□□ -0.54
CTSA-211ENST00000606066 SIGIRRQ6IA17 410 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 OR52W1Q6IF63 320 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 RBMS3Q6XE24 437 aaKnown RBP11.68□□□□□ -0.54
CTSA-211ENST00000606066 TCF23Q7RTU1 214 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 ANKRD13BQ86YJ7 626 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 FAM89BQ8N5H3 189 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 C11orf42Q8N5U0 333 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 OR13D1Q8NGV5 346 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 PLPPR1Q8TBJ4 325 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 TNFRSF14Q92956 283 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 NICN1Q9BSH3 213 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 SUCNR1Q9BXA5 334 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 PLEKHJ1Q9NW61 149 aa11.68□□□□□ -0.54
CTSA-211ENST00000606066 A0A0A6YYJ9 748 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 KBTBD11-OT1A0A1B0GTJ5 212 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 RNASEK-C17orf49H0YIS7 233 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 CLPXO76031 633 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 MT-ND4P03905 459 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 CLEC2LP0C7M8 214 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 CHATP28329 748 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 GLP1RP43220 463 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 VEGFCP49767 419 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 SCAND1P57086 179 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 IDNKQ5T6J7 187 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 HEPN1Q6WQI6 88 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 BRD3OSQ6XYD6 125 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 ZNF497Q6ZNH5 498 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 PDZD9Q8IXQ8 264 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 RAB9BQ9NP90 201 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 HSF4Q9ULV5 492 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 SESN1Q9Y6P5 492 aa11.67□□□□□ -0.54
CTSA-211ENST00000606066 DOCK11Q5JSL3 2073 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 UBE2QL1A1L167 161 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 SOCS1O15524 211 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 TCF21O43680 179 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 GABARAPO95166 117 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 CDK2P24941 298 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 RPS19P39019 145 aaKnown RBP11.66□□□□□ -0.54
CTSA-211ENST00000606066 SERPINB10P48595 397 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 TRAT1Q6PIZ9 186 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 ZNF782Q6ZMW2 699 aaPredicted RBP11.66□□□□□ -0.54
CTSA-211ENST00000606066 Q6ZTK2 550 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 USP43Q70EL4 1123 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 C6orf201Q7Z4U5 140 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 OR13A1Q8NGR1 328 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 MRGPRDQ8TDS7 321 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 SLC6A7Q99884 636 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 FAAP24Q9BTP7 215 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 C19orf24Q9BVV8 132 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 RIMS4Q9H426 269 aaPredicted RBP11.66□□□□□ -0.54
CTSA-211ENST00000606066 FAM96BQ9Y3D0 163 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 ETV7Q9Y603 341 aa11.66□□□□□ -0.54
CTSA-211ENST00000606066 A0A0A6YYD4 124 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 A0A0B4J203 849 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 NPFFO15130 113 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 ORC5O43913 435 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 SCGNO76038 276 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 CGB3P0DN86 165 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 CGB7P0DN87 165 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 COX7A1P24310 79 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 TGFBR1P36897 503 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 DLX1P56177 255 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 LGALS4P56470 323 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 VBP1P61758 197 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 NCS1P62166 190 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 KLRD1Q13241 179 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 ARL6IP1Q15041 203 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 C17orf58Q2M2W7 97 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 MIDNQ504T8 468 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 C6orf183Q5T699 404 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 RUSC1-AS1Q66K80 236 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 BCL6BQ8N143 479 aaPredicted RBP11.65□□□□□ -0.54
CTSA-211ENST00000606066 GAPTQ8N292 157 aa11.65□□□□□ -0.54
CTSA-211ENST00000606066 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms