RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 RPL22L1Q6P5R6 122 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 MOB3BQ86TA1 216 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 WDR31Q8NA23 367 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF548Q8NEK5 533 aaPredicted RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 OR2T12Q8NG77 320 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 Q8WTZ3 238 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 TWIST2Q8WVJ9 160 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 FCAMRQ8WWV6 532 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 FRZBQ92765 325 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM106AQ96A25 262 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 PIK3IP1Q96FE7 263 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 OR51I1Q9H343 314 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 FKBP11Q9NYL4 201 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 TBX21Q9UL17 535 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 PSG8Q9UQ74 426 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 CHD3Q12873 2000 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 J3KR12 359 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 RNASET2O00584 256 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 SH2D1BO14796 132 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 OR5H8P0DN80 308 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 AZU1P20160 251 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 AK4P27144 223 aaPredicted RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 SNCAP37840 140 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 HHEXQ03014 270 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 TRIP6Q15654 476 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 WDR82Q6UXN9 313 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 ACY3Q96HD9 319 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 PYURFQ96I23 114 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 SNRNP25Q9BV90 132 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 Q9H8V8 135 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 PATZ1Q9HBE1 687 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 HINT3Q9NQE9 182 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 CISHQ9NSE2 258 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 AIG1Q9NVV5 245 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 HRASLS2Q9NWW9 162 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 JPT1Q9UK76 154 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 POLR2AP24928 1970 aaKnown RBP4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 DOCK3Q8IZD9 2030 aa4.29□□□□□ -1.72
SPTBN1-206ENST00000602898 ZC3H12DA2A288 527 aaKnown RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 REM1O75628 298 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 WNT1P04628 370 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 RFPL3SP0C7P2 107 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 GLI4P10075 376 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 PSG1P11464 419 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF19P17023 458 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 RPL35AP18077 110 aaKnown RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 APOBEC1P41238 236 aaKnown RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 POLR2JP52435 117 aaKnown RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 FOXA1P55317 472 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 TAS2R31P59538 309 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 PRDX4Q13162 271 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 VWA2Q5GFL6 755 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 DCAF12Q5T6F0 453 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 CPTPQ5TA50 214 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 HECTD2Q5U5R9 776 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OLFML2AQ68BL7 652 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 DMKNQ6E0U4 476 aaPredicted RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 APOOLQ6UXV4 268 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 TEX43Q6ZNM6 134 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 EID2Q8N6I1 236 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 ARL14EPQ8N8R7 260 aaPredicted RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OR4K1Q8NGD4 311 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OR1N2Q8NGR9 330 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC35G5Q96KT7 338 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 TUBB1Q9H4B7 451 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 ELL3Q9HB65 397 aaPredicted RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 NEUROG3Q9Y4Z2 214 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 PLXNA3P51805 1871 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 C9JQL5 133 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 E7EQ34 232 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 F5H697 171 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC16A7O60669 478 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 KLF8O95600 359 aaPredicted RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 TIMP1P01033 207 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 REG1AP05451 166 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 RNASE1P07998 156 aaKnown RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 SP1P08047 785 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 CXCL1P09341 107 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 LINC00032P0C843 101 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 ATF1P18846 271 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 XCR1P46094 333 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 TAS2R19P59542 299 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 BTN3A2P78410 334 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 KLRB1Q12918 225 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 MYBPHQ13203 477 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 TTLL9Q3SXZ7 439 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF678Q5SXM1 525 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 STUMQ69YW2 141 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 HBMQ6B0K9 141 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF549Q6P9A3 640 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 FAM19A1Q7Z5A9 133 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OR4F17Q8NGA8 305 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OR5AP2Q8NGF4 316 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OR4F5Q8NH21 305 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 SEH1LQ96EE3 360 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 TSSK2Q96PF2 358 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OR4F4Q96R69 305 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 FAM173AQ9BQD7 235 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 GINS3Q9BRX5 216 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms