RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 CLVS1Q8IUQ0 354 aaPredicted RBP15.86■□□□□ 0.13
UPF1-209ENST00000600310 OR56B1Q8NGI3 324 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 TNFRSF14Q92956 283 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 SIRT7Q9NRC8 400 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 ETAA1Q9NY74 926 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 NUP50Q9UKX7 468 aa15.86■□□□□ 0.13
UPF1-209ENST00000600310 PAHP00439 452 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 MT-ND4P03905 459 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 IGHV4-38-2P0DP08 117 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 VEGFCP49767 419 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 ZNF497Q6ZNH5 498 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 C6orf201Q7Z4U5 140 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 GAPTQ8N292 157 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 ZNF565Q8N9K5 539 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 LGALS14Q8TCE9 139 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 SLC25A46Q96AG3 418 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 SULT4A1Q9BR01 284 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 PLEKHJ1Q9NW61 149 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 ABRACLQ9P1F3 81 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 HSF4Q9ULV5 492 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 ETV7Q9Y603 341 aa15.85■□□□□ 0.13
UPF1-209ENST00000600310 CENPVL3A0A0U1RRI6 287 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 UBE2QL1A1L167 161 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 METTL21EPA6NDL7 271 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 CGB3P0DN86 165 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 CGB7P0DN87 165 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 TMBIM6P55061 237 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 DLX1P56177 255 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 TMEM50BP56557 158 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 ERVFRD-1P60508 538 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 GPR157Q5UAW9 335 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 NCR3LG1Q68D85 454 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 USP43Q70EL4 1123 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 OR13A1Q8NGR1 328 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 RAB2BQ8WUD1 216 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 LHX4Q969G2 390 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 CYYR1Q96J86 154 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 BCL7BQ9BQE9 202 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 FAAP24Q9BTP7 215 aa15.84■□□□□ 0.13
UPF1-209ENST00000600310 ANK3Q12955 4377 aaKnown RBP15.84■□□□□ 0.13
UPF1-209ENST00000600310 IGHV3OR16-10A0A075B7F0 116 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 ZNF729A6NN14 1252 aaPredicted RBP15.83■□□□□ 0.12
UPF1-209ENST00000600310 RNASEK-C17orf49H0YIS7 233 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 RAB27BO00194 218 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 EPHA1P21709 976 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 BPIFB3P59826 476 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 C17orf58Q2M2W7 97 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 Q6ZTK2 550 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 OR5H6Q8NGV6 325 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 DYRK2Q92630 601 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 DCSTAMPQ9H295 470 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 GAL3ST2Q9H3Q3 398 aa15.83■□□□□ 0.12
UPF1-209ENST00000600310 IGHV1-69DA0A0B4J2H0 117 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 IGHV1-69P01742 117 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 IGHV1-8P0DP01 117 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 GLP1RP43220 463 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 GUCA2AQ02747 115 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 PRB3Q04118 309 aaPredicted RBP15.82■□□□□ 0.12
UPF1-209ENST00000600310 SCGB2A2Q13296 93 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 MOGAT2Q3SYC2 334 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 PLAC9Q5JTB6 97 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 HCP5Q6MZN7 132 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 RTN4RL2Q86UN3 420 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 OR10R2Q8NGX6 335 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 NDNFQ8TB73 568 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 MRGPRDQ8TDS7 321 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 KCTD12Q96CX2 325 aaKnown RBP15.82■□□□□ 0.12
UPF1-209ENST00000600310 ARHGAP5-AS1Q96IT6 56 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 ATG5Q9H1Y0 275 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 HEXA-AS1Q9H8Q6 139 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 LINC00574Q9H8X3 128 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 ZNF69Q9UC07 566 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 SPATA2Q9UM82 520 aa15.82■□□□□ 0.12
UPF1-209ENST00000600310 TRAV39A0A0B4J263 110 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 KBTBD11-OT1A0A1B0GTJ5 212 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 CLPXO76031 633 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 GZMHP20718 246 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 RORCP51449 518 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 KLRD1Q13241 179 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 HEPN1Q6WQI6 88 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 C9orf139Q6ZV77 190 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 CCDC107Q8WV48 283 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 RAB3CQ96E17 227 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 PECRQ9BY49 303 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 RHBDL2Q9NX52 303 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 CALYQ9NYX4 217 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 TRAPPC2LQ9UL33 140 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 SESN1Q9Y6P5 492 aa15.81■□□□□ 0.12
UPF1-209ENST00000600310 DSCAML1Q8TD84 2053 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 NPIPB11E5RHQ5 1161 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 MMP23AO75900 390 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 CDK2P24941 298 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 FPR2P25090 351 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 UBE2E1P51965 193 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 DYNC1I2Q13409 638 aaKnown RBP15.8■□□□□ 0.12
UPF1-209ENST00000600310 TUSC1Q2TAM9 212 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 ZNF782Q6ZMW2 699 aaPredicted RBP15.8■□□□□ 0.12
UPF1-209ENST00000600310 PDZD9Q8IXQ8 264 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 OR4K15Q8NH41 348 aa15.8■□□□□ 0.12
UPF1-209ENST00000600310 MRPL30Q8TCC3 161 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms