RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CD83Q01151 205 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 BEAN1Q3B7T3 259 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 PIGYQ3MUY2 71 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 YIF1BQ5BJH7 314 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 DDI2Q5TDH0 399 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 HIST2H2BDQ6DRA6 164 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 DMKNQ6E0U4 476 aaPredicted RBP12.63□□□□□ -0.39
VRK3-221ENST00000600284 DHRSXQ8N5I4 330 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 OR5AU1Q8NGC0 362 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 OR10K1Q8NGX5 313 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 CYGBQ8WWM9 190 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 GHSRQ92847 366 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 OR5M11Q96RB7 305 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 CITED2Q99967 270 aaPredicted RBP12.63□□□□□ -0.39
VRK3-221ENST00000600284 DPCDQ9BVM2 203 aaPredicted RBP12.63□□□□□ -0.39
VRK3-221ENST00000600284 ING4Q9UNL4 249 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A18PA6NE21 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A16PA6NEW6 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A20PA6NIJ5 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A9PA6NNJ1 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 ADARB2-AS1A8MUL3 147 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A12PA8MX19 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A5PA8MXJ8 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 G3V4G9 280 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 CDRT1O95170 752 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 CLIC3O95833 236 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A15PP0C7V4 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A13PP0C7W8 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A14PP0C7W9 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 FAM90A24PP0C7X0 464 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 IGFBP3P17936 291 aaPredicted RBP12.62□□□□□ -0.39
VRK3-221ENST00000600284 RBM11P57052 281 aaKnown RBP12.62□□□□□ -0.39
VRK3-221ENST00000600284 ADARB1P78563 741 aaKnown RBP12.62□□□□□ -0.39
VRK3-221ENST00000600284 RIPK1Q13546 671 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 GPR176Q14439 515 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
VRK3-221ENST00000600284 Q499Y3 187 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 SUMF2Q8NBJ7 301 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 ZNF485Q8NCK3 441 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 PLPPR1Q8TBJ4 325 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 RPEQ96AT9 228 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 R3HDM4Q96D70 268 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 CKLFQ9UBR5 152 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 CLEC2DQ9UHP7 191 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 PSG11Q9UQ72 335 aa12.62□□□□□ -0.39
VRK3-221ENST00000600284 LALBAP00709 142 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 RAB7AP51149 207 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 TAS2R43P59537 309 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 LRRC36Q1X8D7 754 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 MPV17LQ2QL34 196 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 TMEM95Q3KNT9 176 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 ABCA11PQ4W5N1 156 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 CENPVQ7Z7K6 275 aaPredicted RBP12.61□□□□□ -0.39
VRK3-221ENST00000600284 LYG1Q8N1E2 194 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 MRGPRDQ8TDS7 321 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 GGHQ92820 318 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 TOMM40LQ969M1 308 aa12.61□□□□□ -0.39
VRK3-221ENST00000600284 CNOT2Q9NZN8 540 aaKnown RBP12.61□□□□□ -0.39
VRK3-221ENST00000600284 PRKDCP78527 4128 aaKnown RBP12.61□□□□□ -0.39
VRK3-221ENST00000600284 EFCAB10A6NFE3 127 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 PLXNB1O43157 2135 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 OR7C1O76099 320 aaPredicted RBP12.6□□□□□ -0.39
VRK3-221ENST00000600284 AMY1AP04745 511 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 AMY2AP04746 511 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 CD1AP06126 327 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 LPLP06858 475 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 GTF2F2P13984 249 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 FSTP19883 344 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 RPS11P62280 158 aaKnown RBP eCLIP12.6□□□□□ -0.39
VRK3-221ENST00000600284 ST3GAL4Q11206 333 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 MADCAM1Q13477 382 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 UTF1Q5T230 341 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 REC114Q7Z4M0 266 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 CDH26Q8IXH8 852 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 OR8H3Q8N146 312 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 OR52M1Q8NGK5 317 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 RFESDQ8TAC1 157 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 MRPS24Q96EL2 167 aaKnown RBP12.6□□□□□ -0.39
VRK3-221ENST00000600284 PGLYRP3Q96LB9 341 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 ZNF184Q99676 751 aaPredicted RBP12.6□□□□□ -0.39
VRK3-221ENST00000600284 TGP01266 2768 aa12.6□□□□□ -0.39
VRK3-221ENST00000600284 TMEM30CPA0ZSE6 113 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 GEMIN2O14893 280 aaKnown RBP12.59□□□□□ -0.39
VRK3-221ENST00000600284 ORC5O43913 435 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 SERPINA2P20848 420 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 SSTR5P35346 364 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 OR13C5Q8NGS8 318 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 SPACA1Q9HBV2 294 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 PLCXD1Q9NUJ7 323 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 MOB4Q9Y3A3 225 aa12.59□□□□□ -0.39
VRK3-221ENST00000600284 TSSC4Q9Y5U2 329 aaPredicted RBP12.59□□□□□ -0.39
VRK3-221ENST00000600284 TRBV5-7A0A0A0MS05 114 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 SNRNP70P08621 437 aaKnown RBP12.58□□□□□ -0.4
VRK3-221ENST00000600284 CAPGP40121 348 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 RCN1Q15293 331 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 SLC22A6Q4U2R8 563 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 FBLN7Q53RD9 439 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 ATAD3CQ5T2N8 411 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 C8orf59Q8N0T1 100 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms