RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 RNF170Q96K19 258 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 ENPP5Q9UJA9 477 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 DNAH10Q8IVF4 4471 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 M0QZK8 103 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 SC5DO75845 299 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 INMTO95050 263 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 BRS3P32247 399 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 PRDX4Q13162 271 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 SSX1Q16384 188 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 OR13C5Q8NGS8 318 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 HPSE2Q8WWQ2 592 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 UFD1Q92890 307 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 CHST5Q9GZS9 411 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 ABCB9Q9NP78 766 aa13.8□□□□□ -0.2
SSBP4-207ENST00000600244 PNMA8CA0A1B0GUJ8 204 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 A6NIN4 97 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 ZNF850A8MQ14 1090 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 HSMCR30P0CW71 290 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 PRDX2P32119 198 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 CLVS2Q5SYC1 327 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 LIPKQ5VXJ0 399 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 ZNF529Q6P280 563 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 LCNL1Q6ZST4 164 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 KCTD8Q6ZWB6 473 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 UTS2BQ765I0 119 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 MS4A15Q8N5U1 240 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 OR13C3Q8NGS6 347 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 PP6455Q8WZ26 134 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 PIGCQ92535 297 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 MUL1Q969V5 352 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 FGGYQ96C11 551 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 OR51I2Q9H344 312 aa13.79□□□□□ -0.2
SSBP4-207ENST00000600244 TRBV5-7A0A0A0MS05 114 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 IGHV2-26A0A0B4J1V2 119 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 NRASP01111 189 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 TK1P04183 234 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 HTR1DP28221 377 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 UBE2V2Q15819 145 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 CEACAM21Q3KPI0 293 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 Q499Y3 187 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 ACP7Q6ZNF0 438 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 ZDHHC23Q8IYP9 409 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 OR4P4Q8NGL7 312 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 RASL12Q9NYN1 266 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 DHDHQ9UQ10 334 aa13.78□□□□□ -0.2
SSBP4-207ENST00000600244 IGKV1-9A0A0C4DH69 117 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 MEX3AA1L020 520 aaKnown RBP13.77□□□□□ -0.21
SSBP4-207ENST00000600244 GPX5O75715 221 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 FHL3Q13643 280 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 NEDD8Q15843 81 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 FAM27D1Q5T7N8 215 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 OR5A2Q8NGI9 324 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 ZNF671Q8TAW3 534 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 LINC00476Q8WZB0 136 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 DERL3Q96Q80 235 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 PLEKHA1Q9HB21 404 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 NDUFB11Q9NX14 153 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 DPM3Q9P2X0 92 aa13.77□□□□□ -0.21
SSBP4-207ENST00000600244 MAGEA13PA6NCF6 341 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 OCM2P0CE71 109 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 PSMA1P25786 263 aaKnown RBP13.76□□□□□ -0.21
SSBP4-207ENST00000600244 PSMB9P28065 219 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 CDX1P47902 265 aaPredicted RBP13.76□□□□□ -0.21
SSBP4-207ENST00000600244 SOX2P48431 317 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 RPS25P62851 125 aaKnown RBP13.76□□□□□ -0.21
SSBP4-207ENST00000600244 SLC35B1P78383 322 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 TRAM1Q15629 374 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 CEP78Q5JTW2 689 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 CD200R1LQ6Q8B3 271 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 TMEM91Q6ZNR0 172 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 MOB3CQ70IA8 216 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 SERPINA12Q8IW75 414 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 GATAD1Q8WUU5 269 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 TSEN15Q8WW01 171 aaKnown RBP13.76□□□□□ -0.21
SSBP4-207ENST00000600244 TMEM106AQ96A25 262 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 OR14A2Q96R54 314 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 GPR173Q9NS66 373 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 LINC00527Q9UJ94 153 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 DSCAML1Q8TD84 2053 aa13.76□□□□□ -0.21
SSBP4-207ENST00000600244 PQLC2LA1A4F0 135 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 OR5B21A6NL26 309 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 CCRL2O00421 344 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 GATBO75879 557 aaKnown RBP13.75□□□□□ -0.21
SSBP4-207ENST00000600244 RPLP1P05386 114 aaKnown RBP13.75□□□□□ -0.21
SSBP4-207ENST00000600244 CD2P06729 351 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 ZNF20P17024 532 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 IGFBP3P17936 291 aaPredicted RBP13.75□□□□□ -0.21
SSBP4-207ENST00000600244 ATF1P18846 271 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 GPM6AP51674 278 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 INSL4Q14641 139 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 ACSM3Q53FZ2 586 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 PLCXD3Q63HM9 321 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 TCF23Q7RTU1 214 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 SATL1Q86VE3 508 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 DNAAF1Q8NEP3 725 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 IL17DQ8TAD2 202 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 AQP3Q92482 292 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 THRSPQ92748 146 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 TMED9Q9BVK6 235 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 CLEC7AQ9BXN2 247 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms