RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 ZNF497Q6ZNH5 498 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 OR11H6Q8NGC7 330 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 YIPF6Q96EC8 236 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 DUX5Q96PT3 197 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 CST11Q9H112 138 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 LPAR5Q9H1C0 372 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 RNF167Q9H6Y7 350 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 ING3Q9NXR8 418 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 ZNRD1Q9P1U0 126 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 SESN1Q9Y6P5 492 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 TRGV10A0A0A0MS01 117 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 TRAV39A0A0B4J263 110 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 NPIPB11E5RHQ5 1161 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 HOXA3O43365 443 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 COX7A1P24310 79 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 GADD45AP24522 165 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 CHATP28329 748 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 MIDNQ504T8 468 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 PRAMEF5Q5TYX0 476 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 ZNF626Q68DY1 528 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 RAB12Q6IQ22 244 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 HEPN1Q6WQI6 88 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 Q6ZPA2 131 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM89BQ8N5H3 189 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 OR51D1Q8NGF3 324 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM216AQ8WUB2 273 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 C19orf24Q9BVV8 132 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 HEXA-AS1Q9H8Q6 139 aa15.84■□□□□ 0.13
SHKBP1-221ENST00000599833 MEIKINA0A087WXM9 373 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 A0A087X0M5 115 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 KBTBD11-OT1A0A1B0GTJ5 212 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 A0A1B0GX30 115 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 MEIOCA2RUB1 952 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 ZNF729A6NN14 1252 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 IFITM5A6NNB3 132 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 C15orf65H3BRN8 121 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 MT-ND4P03905 459 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 RNASE1P07998 156 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 CD36P16671 472 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 OMGP23515 440 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 PAX6P26367 422 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 IER3P46695 156 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 BAMBIQ13145 260 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 RAB11BQ15907 218 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 ATAD3CQ5T2N8 411 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 OR2W3Q7Z3T1 314 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 LHFPL4Q7Z7J7 247 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 DYNAPQ8N1N2 210 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 KCNG3Q8TAE7 436 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 TMEM158Q8WZ71 300 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 JMJD8Q96S16 334 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 TMEM59Q9BXS4 323 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 BARHL1Q9BZE3 327 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 TMEM133Q9H2Q1 129 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 SPACA1Q9HBV2 294 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 OR6C3Q9NZP0 311 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 STEAP1Q9UHE8 339 aa15.83■□□□□ 0.12
SHKBP1-221ENST00000599833 IGHV2-26A0A0B4J1V2 119 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 hCG_1809904A0A1W2PP81 198 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 A0A1W2PPE2 198 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 A0A1W2PR64 198 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 A0A1W2PRV1 198 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 RNF212BA8MTL3 300 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 PDCD6O75340 191 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 GLAP06280 429 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 ARSBP15848 533 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 RAB3BP20337 219 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 FUT3P21217 361 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 CDK2P24941 298 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 CD34P28906 385 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 SSTR5P35346 364 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 HES5Q5TA89 166 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 TRAPPC6BQ86SZ2 158 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 FAM3DQ96BQ1 224 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 KIRREL1Q96J84 757 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 SULT4A1Q9BR01 284 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 CENPOQ9BU64 300 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 MEGF9Q9H1U4 602 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 GAL3ST2Q9H3Q3 398 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 PLGRKTQ9HBL7 147 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 CALYQ9NYX4 217 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 PEX16Q9Y5Y5 336 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 TRRAPQ9Y4A5 3859 aa15.82■□□□□ 0.12
SHKBP1-221ENST00000599833 A0A0B4J203 849 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 TMEM272A0A1B0GTI8 110 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 TMEM30CPA0ZSE6 113 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 SMIM30A4D0T7 59 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 AIPO00170 330 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 IL1AP01583 271 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 IGLV1-47P01700 117 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 IGHV4-59P01825 116 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 GLP1RP43220 463 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 PSMD7P51665 324 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 TMEM50BP56557 158 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 C2orf76Q3KRA6 126 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 TMEM86BQ8N661 226 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 BEND2Q8NDZ0 799 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 OR4P4Q8NGL7 312 aa15.81■□□□□ 0.12
SHKBP1-221ENST00000599833 MRGPRDQ8TDS7 321 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms