RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 AKR1E2Q96JD6 320 aa11.46□□□□□ -0.57
LIG1-218ENST00000599322 UQCC2Q9BRT2 126 aa11.46□□□□□ -0.57
LIG1-218ENST00000599322 TMED9Q9BVK6 235 aa11.46□□□□□ -0.57
LIG1-218ENST00000599322 ANKRD60Q9BZ19 345 aa11.46□□□□□ -0.57
LIG1-218ENST00000599322 CST11Q9H112 138 aa11.46□□□□□ -0.57
LIG1-218ENST00000599322 Q9H521 79 aa11.46□□□□□ -0.57
LIG1-218ENST00000599322 RANBP3Q9H6Z4 567 aaPredicted RBP11.46□□□□□ -0.57
LIG1-218ENST00000599322 ZNF696Q9H7X3 374 aa11.46□□□□□ -0.57
LIG1-218ENST00000599322 KIF25Q9UIL4 384 aa11.46□□□□□ -0.57
LIG1-218ENST00000599322 TRAV8-7A0A075B6U6 113 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 TRAV24A0A0B4J272 114 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 CRTAPO75718 401 aaPredicted RBP11.45□□□□□ -0.58
LIG1-218ENST00000599322 UBBP0CG47 229 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 PSMA1P25786 263 aaKnown RBP11.45□□□□□ -0.58
LIG1-218ENST00000599322 KIR2DS4P43632 304 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 RBM48Q5RL73 367 aaKnown RBP11.45□□□□□ -0.58
LIG1-218ENST00000599322 SLC35E4Q6ICL7 350 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 TCF23Q7RTU1 214 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 CEACAM19Q7Z692 300 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 OR10A7Q8NGE5 316 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 OR9G1Q8NH87 305 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 COQ2Q96H96 371 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 IFT22Q9H7X7 185 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 CALYQ9NYX4 217 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 FBLN5Q9UBX5 448 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 TCF19Q9Y242 345 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 MGAM2Q2M2H8 2515 aa11.45□□□□□ -0.58
LIG1-218ENST00000599322 GEMIN2O14893 280 aaKnown RBP11.44□□□□□ -0.58
LIG1-218ENST00000599322 KCNAB3O43448 404 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 DYNLT3P51808 116 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 SLC35A2P78381 396 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 HSD17B12Q53GQ0 312 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 SLC16A12Q6ZSM3 486 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 Q6ZTK2 550 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 MRGPRDQ8TDS7 321 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 PHYHIPQ92561 330 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 CNBD2Q96M20 576 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 SELENOIQ9C0D9 397 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 PRSS22Q9GZN4 317 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 PPIL3Q9H2H8 161 aaKnown RBP11.44□□□□□ -0.58
LIG1-218ENST00000599322 ISYNA1Q9NPH2 558 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 RAB26Q9ULW5 256 aa11.44□□□□□ -0.58
LIG1-218ENST00000599322 TRRAPQ9Y4A5 3859 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A10PA6NDY2 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A18PA6NE21 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A16PA6NEW6 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A20PA6NIJ5 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A7PA6NKC0 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A22PA8MWA6 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A12PA8MX19 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A5PA8MXJ8 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A23PA8MXZ1 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 OOSP1A8MZH6 123 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 ARL6IP5O75915 188 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 IL1AP01583 271 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A15PP0C7V4 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A13PP0C7W8 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A14PP0C7W9 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM90A24PP0C7X0 464 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 PAX6P26367 422 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 CD34P28906 385 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 RAB13P51153 203 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 PAX5Q02548 391 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 PRR31Q5SQ13 230 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 PRSS48Q7RTY5 328 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 RPEQ96AT9 228 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 AJUBAQ96IF1 538 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 OR5M11Q96RB7 305 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 DUSP21Q9H596 190 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 TRAPPC2LQ9UL33 140 aa11.43□□□□□ -0.58
LIG1-218ENST00000599322 FAM172BPA6NC97 362 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 CA11O75493 328 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 MMP23AO75900 390 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 GLAP06280 429 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 MGMTP16455 207 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 SRMP19623 302 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 VHLP40337 213 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 PROK1P58294 105 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 LTC4SQ16873 150 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 HLA-DRB5Q30154 266 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 RSBN1Q5VWQ0 802 aaPredicted RBP11.42□□□□□ -0.58
LIG1-218ENST00000599322 LIPKQ5VXJ0 399 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 RAB12Q6IQ22 244 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 TRAT1Q6PIZ9 186 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 UNQ9370/PRO34162Q6UXP9 181 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 C16orf82Q7Z2V1 217 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 OR4P4Q8NGL7 312 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 OR13A1Q8NGR1 328 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 OR10X1Q8NGY0 326 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 KIRREL1Q96J84 757 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 ZNF286AQ9HBT8 521 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 ETAA1Q9NY74 926 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 PEX16Q9Y5Y5 336 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 CMYA5Q8N3K9 4069 aa11.42□□□□□ -0.58
LIG1-218ENST00000599322 A0A087X0M5 115 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 A0A1B0GX30 115 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 A6NDX4 124 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms