RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 TRAV1-2A0A0B4J238 106 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 TMEM30CPA0ZSE6 113 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 H3BUI4 141 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 CLDN34H7C241 214 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 ARG1P05089 322 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 RNASE1P07998 156 aaKnown RBP12.21□□□□□ -0.45
IRF3-211ENST00000596644 CD37P11049 281 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 ARSBP15848 533 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 CDK2P24941 298 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 PAX5Q02548 391 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 DYNC1I2Q13409 638 aaKnown RBP12.21□□□□□ -0.45
IRF3-211ENST00000596644 SYT6Q5T7P8 510 aaPredicted RBP12.21□□□□□ -0.45
IRF3-211ENST00000596644 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 OR52W1Q6IF63 320 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 HEPN1Q6WQI6 88 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 OR13A1Q8NGR1 328 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 SSMEM1Q8WWF3 244 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 TMEM133Q9H2Q1 129 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 RCC2Q9P258 522 aaKnown RBP12.21□□□□□ -0.45
IRF3-211ENST00000596644 SSR3Q9UNL2 185 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 PEX16Q9Y5Y5 336 aa12.21□□□□□ -0.45
IRF3-211ENST00000596644 FBN1P35555 2871 aaKnown RBP12.21□□□□□ -0.45
IRF3-211ENST00000596644 KBTBD11-OT1A0A1B0GTJ5 212 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 BTBD17A6NE02 478 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 MMP23AO75900 390 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 RAB3BP20337 219 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 FUT3P21217 361 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 OMGP23515 440 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 RPS27AP62979 156 aaKnown RBP12.2□□□□□ -0.46
IRF3-211ENST00000596644 UNC119Q13432 240 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 NKAPLQ5M9Q1 402 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 HES5Q5TA89 166 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 OR2W3Q7Z3T1 314 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 LDLRAD3Q86YD5 345 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 TMEM86BQ8N661 226 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 OR11H6Q8NGC7 330 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 MRGPRDQ8TDS7 321 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 NEDD4LQ96PU5 975 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 CLEC7AQ9BXN2 247 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 DPAGT1Q9H3H5 408 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 TXNL4BQ9NX01 149 aaKnown RBP12.2□□□□□ -0.46
IRF3-211ENST00000596644 ETAA1Q9NY74 926 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 CALYQ9NYX4 217 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 ZNRD1Q9P1U0 126 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 POMT1Q9Y6A1 747 aa12.2□□□□□ -0.46
IRF3-211ENST00000596644 IGHV2-26A0A0B4J1V2 119 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 TRAV39A0A0B4J263 110 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 SHISA3A0PJX4 238 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 TMEM14DPA8MWL7 114 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 ODF3BA8MYP8 253 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 AIPO00170 330 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 PDCD6O75340 191 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 IGHV4-59P01825 116 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 CD36P16671 472 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 NFYBP25208 207 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 FGF9P31371 208 aaPredicted RBP12.19□□□□□ -0.46
IRF3-211ENST00000596644 IER3P46695 156 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 CLDN12P56749 244 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 OR10A3P58181 314 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 C17orf58Q2M2W7 97 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 ZNF626Q68DY1 528 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 BEND2Q8NDZ0 799 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 OR51D1Q8NGF3 324 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 CCDC107Q8WV48 283 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 C17orf50Q8WW18 174 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 FAM3DQ96BQ1 224 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 CHCHD6Q9BRQ6 235 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 URM1Q9BTM9 101 aaKnown RBP12.19□□□□□ -0.46
IRF3-211ENST00000596644 OR51E2Q9H255 320 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 ZNF696Q9H7X3 374 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 STEAP1Q9UHE8 339 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 TBL2Q9Y4P3 447 aaKnown RBP12.19□□□□□ -0.46
IRF3-211ENST00000596644 COL6A5A8TX70 2615 aa12.19□□□□□ -0.46
IRF3-211ENST00000596644 LOC100506127A0A0U1RQW1 187 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 UBE2QL1A1L167 161 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 FAM172BPA6NC97 362 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 IL1AP01583 271 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 GLAP06280 429 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 GDNFP39905 211 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 QRFPP83859 136 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 SIGIRRQ6IA17 410 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 C16orf87Q6PH81 154 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 BAIAP2L2Q6UXY1 529 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 ZNF497Q6ZNH5 498 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 LHFPL4Q7Z7J7 247 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 RTN4RL2Q86UN3 420 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 ABHD12Q8N2K0 398 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 GCDHQ92947 438 aaPredicted RBP12.18□□□□□ -0.46
IRF3-211ENST00000596644 NICN1Q9BSH3 213 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 TM2D1Q9BX74 207 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 CHIAQ9BZP6 476 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 IDI2-AS1Q9NZ38 188 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 TRAPPC2LQ9UL33 140 aa12.18□□□□□ -0.46
IRF3-211ENST00000596644 IFITM5A6NNB3 132 aa12.17□□□□□ -0.46
IRF3-211ENST00000596644 TOR1AO14656 332 aa12.17□□□□□ -0.46
IRF3-211ENST00000596644 CA11O75493 328 aa12.17□□□□□ -0.46
IRF3-211ENST00000596644 MT-ND4P03905 459 aa12.17□□□□□ -0.46
IRF3-211ENST00000596644 CGB3P0DN86 165 aa12.17□□□□□ -0.46
IRF3-211ENST00000596644 CGB7P0DN87 165 aa12.17□□□□□ -0.46
IRF3-211ENST00000596644 GZMHP20718 246 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms