RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 OR13D1Q8NGV5 346 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 GCDHQ92947 438 aaPredicted RBP9.03□□□□□ -0.96
VRK3-210ENST00000596121 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 TMEM133Q9H2Q1 129 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 ZMAT3Q9HA38 289 aaKnown RBP9.03□□□□□ -0.96
VRK3-210ENST00000596121 ZNF286AQ9HBT8 521 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 TAS2R3Q9NYW6 316 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 POMT1Q9Y6A1 747 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 KBTBD11-OT1A0A1B0GTJ5 212 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 TRDV1A0A1B0GX56 115 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 FUOMA2VDF0 154 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 TMEM14DPA8MWL7 114 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 NPIPB11E5RHQ5 1161 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 GPR137BO60478 399 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 MPIG6BO95866 241 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 PSMB9P28065 219 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 HTR2CP28335 458 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 RAB13P51153 203 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 CLDN12P56749 244 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 OR10A3P58181 314 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 RPS27AP62979 156 aaKnown RBP9.02□□□□□ -0.97
VRK3-210ENST00000596121 AWAT1Q58HT5 328 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 SLC35E4Q6ICL7 350 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 RAB12Q6IQ22 244 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 ZNF497Q6ZNH5 498 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 LINC00596Q86U02 117 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 NR2C2APQ86WQ0 139 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 OR4P4Q8NGL7 312 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 RFESDQ8TAC1 157 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 UBALD1Q8TB05 177 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 MRGPRDQ8TDS7 321 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 CCDC107Q8WV48 283 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 MRPS24Q96EL2 167 aaKnown RBP9.02□□□□□ -0.97
VRK3-210ENST00000596121 KIRREL1Q96J84 757 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 NICN1Q9BSH3 213 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 BARHL1Q9BZE3 327 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 LINC00574Q9H8X3 128 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 PCDHB16Q9NRJ7 776 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 CALYQ9NYX4 217 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 OR6C3Q9NZP0 311 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 C1RLQ9NZP8 487 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 GHRLQ9UBU3 117 aa9.02□□□□□ -0.97
VRK3-210ENST00000596121 A0A087X0M5 115 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 TRAV1-2A0A0B4J238 106 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 A0A1B0GX30 115 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 UBE2QL1A1L167 161 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 ZNF729A6NN14 1252 aaPredicted RBP9.01□□□□□ -0.97
VRK3-210ENST00000596121 C15orf65H3BRN8 121 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 H3BUX3 64 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 CCRL2O00421 344 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 SLC17A2O00624 439 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 ARL6IP5O75915 188 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 PAHP00439 452 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 IGHV3-7P01780 117 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 SSTR5P35346 364 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 GLP1RP43220 463 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 KCNJ3P48549 501 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 DYNC1I2Q13409 638 aaKnown RBP9.01□□□□□ -0.97
VRK3-210ENST00000596121 SSX2Q16385 188 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 KCTD21Q4G0X4 260 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 PLA1AQ53H76 456 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 C22orf42Q6IC83 251 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 Q6ZPA2 131 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 GAPTQ8N292 157 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 ABHD12Q8N2K0 398 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 OR6M1Q8NGM8 313 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 LEAP2Q969E1 77 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 SSX3Q99909 188 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 GAL3ST2Q9H3Q3 398 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 PEX16Q9Y5Y5 336 aa9.01□□□□□ -0.97
VRK3-210ENST00000596121 TMEM30CPA0ZSE6 113 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A10PA6NDY2 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A18PA6NE21 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A16PA6NEW6 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A20PA6NIJ5 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A7PA6NKC0 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FOXI3A8MTJ6 420 aaPredicted RBP9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A22PA8MWA6 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A12PA8MX19 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A5PA8MXJ8 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A23PA8MXZ1 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 LY6LH3BQJ8 138 aa9□□□□□ -0.97
VRK3-210ENST00000596121 LDLRAD4O15165 306 aa9□□□□□ -0.97
VRK3-210ENST00000596121 BPNT1O95861 308 aa9□□□□□ -0.97
VRK3-210ENST00000596121 IL1AP01583 271 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A15PP0C7V4 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A13PP0C7W8 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A14PP0C7W9 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAM90A24PP0C7X0 464 aa9□□□□□ -0.97
VRK3-210ENST00000596121 UBBP0CG47 229 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FUT3P21217 361 aa9□□□□□ -0.97
VRK3-210ENST00000596121 MDKP21741 143 aaPredicted RBP9□□□□□ -0.97
VRK3-210ENST00000596121 NFYBP25208 207 aa9□□□□□ -0.97
VRK3-210ENST00000596121 CHATP28329 748 aa9□□□□□ -0.97
VRK3-210ENST00000596121 CD34P28906 385 aa9□□□□□ -0.97
VRK3-210ENST00000596121 LGALS4P56470 323 aa9□□□□□ -0.97
VRK3-210ENST00000596121 NEDD8Q15843 81 aa9□□□□□ -0.97
VRK3-210ENST00000596121 LY6EQ16553 131 aa9□□□□□ -0.97
VRK3-210ENST00000596121 LTC4SQ16873 150 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms