RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	SNU13	P55769	128 aa	Known RBP	10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	EDDM3B	P56851	147 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZP1	P60852	638 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ST3GAL4	Q11206	333 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SPIN3	Q5JUX0	258 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZNF529	Q6P280	563 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	BAIAP2L2	Q6UXY1	529 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TCF23	Q7RTU1	214 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR8H2	Q8N162	312 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZNF485	Q8NCK3	441 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR5M8	Q8NGP6	311 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR52N1	Q8NH53	320 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GPR148	Q8TDV2	347 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SNX22	Q96L94	193 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZMAT4	Q9H898	229 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	NEK6	Q9HC98	313 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	HMG20A	Q9NP66	347 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	BABAM2	Q9NXR7	383 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CNOT2	Q9NZN8	540 aa	Known RBP	10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	RBMY1B	A6NDE4	496 aa	Known RBP	10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	RBMY1E	A6NEQ0	496 aa	Known RBP	10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	EFCAB10	A6NFE3	127 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OGG1	O15527	345 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	PSPN	O60542	156 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	MMP23A	O75900	390 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	RBMY1D	P0C7P1	496 aa	Known RBP	10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	DUSP1	P28562	367 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	MED21	Q13503	144 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	KISS1	Q15726	138 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZNF260	Q3ZCT1	412 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	LCNL1	Q6ZST4	164 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GDPD3	Q7L5L3	318 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SAXO1	Q8IYX7	474 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR52N4	Q8NGI2	321 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR51A2	Q8NGJ7	313 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR4P4	Q8NGL7	312 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	NRG4	Q8WWG1	115 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CHST6	Q9GZX3	395 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	EDA2R	Q9HAV5	297 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	PLCXD1	Q9NUJ7	323 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TAS2R4	Q9NYW5	299 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	PSORS1C1	Q9UIG5	152 aa		10.8	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ERICH4	A6NGS2	130 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	RBP4	P02753	201 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CD2	P06729	351 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	RAB3A	P20336	220 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GABRR1	P24046	479 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SLC6A1	P30531	599 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	BRS3	P32247	399 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	AQP4	P55087	323 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	EDDM3A	Q14507	147 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GRK1	Q15835	563 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	DMKN	Q6E0U4	476 aa	Predicted RBP	10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	AHSA2	Q719I0	299 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	BPIFB6	Q8NFQ5	453 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR13C5	Q8NGS8	318 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TMEM106A	Q96A25	262 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	PGLYRP3	Q96LB9	341 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZNF714	Q96N38	554 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	RHOF	Q9HBH0	211 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	EXOSC4	Q9NPD3	245 aa	Known RBP	10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	FKBP14	Q9NWM8	211 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CHCHD3	Q9NX63	227 aa	Known RBP	10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	DPM3	Q9P2X0	92 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GSTK1	Q9Y2Q3	226 aa		10.79	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TRBV5-5	A0A0J9YX44	114 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SIRPB1	O00241	398 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GABRP	O00591	440 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR2H2	O95918	312 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	C21orf33	P30042	268 aa	Predicted RBP	10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR3A1	P47881	315 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	STX19	Q8N4C7	294 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TPRX1	Q8N7U7	411 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZFP41	Q8N8Y5	198 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GHSR	Q92847	366 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ISOC1	Q96CN7	298 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CPNE2	Q96FN4	548 aa	Predicted RBP	10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CLEC7A	Q9BXN2	247 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TMEM133	Q9H2Q1	129 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GLS2	Q9UI32	602 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SESN1	Q9Y6P5	492 aa		10.78	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SORL1	Q92673	2214 aa		10.77	□□□□□ -0.68
SHKBP1-208	ENST00000595726	FAM172BP	A6NC97	362 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	LINC01548	A6NM66	108 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	SERPINE3	A8MV23	424 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726		H0YJX3	145 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	SH2D1B	O14796	132 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	MGST3	O14880	152 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	MYL12B	O14950	172 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	MAGEB3	O15480	346 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	JTB	O76095	146 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	RPLP1	P05386	114 aa	Known RBP	10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	TMEM225B	P0DP42	221 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	WNT4	P56705	351 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	TAS2R43	P59537	309 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	RPS11	P62280	158 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	MEF2C	Q06413	473 aa	Predicted RBP	10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	YIF1B	Q5BJH7	314 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	PXT1	Q8NFP0	134 aa		10.77	□□□□□ -0.69
SHKBP1-208	ENST00000595726	CHPT1	Q8WUD6	406 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms