RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 DEFB112Q30KQ8 113 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 OR10K2Q6IF99 312 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 NEDD4LQ96PU5 975 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 CHCHD6Q9BRQ6 235 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 ING3Q9NXR8 418 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 KBTBD11-OT1A0A1B0GTJ5 212 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 CLDN34H7C241 214 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 AIPO00170 330 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 CGB3P0DN86 165 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 CGB7P0DN87 165 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 GZMHP20718 246 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 DLX1P56177 255 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 BAMBIQ13145 260 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 C2orf76Q3KRA6 126 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 SIGIRRQ6IA17 410 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 Q6YL49 198 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 OR11H6Q8NGC7 330 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 OR51D1Q8NGF3 324 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 LINC00574Q9H8X3 128 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 CUBNO60494 3623 aa21.02■□□□□ 0.96
TRIM28-204ENST00000594806 MEX3AA1L020 520 aaKnown RBP21.01■□□□□ 0.95
TRIM28-204ENST00000594806 MEIOCA2RUB1 952 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 NOTOA8MTQ0 251 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 FBP1P09467 338 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 OR10A3P58181 314 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 ZNF782Q6ZMW2 699 aaPredicted RBP21.01■□□□□ 0.95
TRIM28-204ENST00000594806 ZNF497Q6ZNH5 498 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 PNKDQ8N490 385 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 TMEM86BQ8N661 226 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 ZDHHC22Q8N966 263 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 YIPF6Q96EC8 236 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 ETAA1Q9NY74 926 aa21.01■□□□□ 0.95
TRIM28-204ENST00000594806 SOX21Q9Y651 276 aaPredicted RBP21.01■□□□□ 0.95
TRIM28-204ENST00000594806 A0A0U1RQK1 487 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 LOC100506127A0A0U1RQW1 187 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 LDLRAD4O15165 306 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 SAA4P35542 130 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 GLP1RP43220 463 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 LGALS4P56470 323 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 PRB3Q04118 309 aaPredicted RBP21■□□□□ 0.95
TRIM28-204ENST00000594806 HES5Q5TA89 166 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 BRICD5Q6PL45 260 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 RTN4RL2Q86UN3 420 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 GAPTQ8N292 157 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 FAM89BQ8N5H3 189 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 OR10A7Q8NGE5 316 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 OR13A1Q8NGR1 328 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 TMEM133Q9H2Q1 129 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 RAB22AQ9UL26 194 aa21■□□□□ 0.95
TRIM28-204ENST00000594806 PAHP00439 452 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 MT-ND4P03905 459 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 COX7A1P24310 79 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 CDK2P24941 298 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 CHATP28329 748 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 CLDN12P56749 244 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 C17orf58Q2M2W7 97 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 LDLRAD3Q86YD5 345 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 PTX4Q96A99 478 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 LPAR5Q9H1C0 372 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 RAB9BQ9NP90 201 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 CALYQ9NYX4 217 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 TBL2Q9Y4P3 447 aaKnown RBP20.99■□□□□ 0.95
TRIM28-204ENST00000594806 POMT1Q9Y6A1 747 aa20.99■□□□□ 0.95
TRIM28-204ENST00000594806 A0A1W2PRD5 423 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 A0A1W2PRF3 423 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 A0A1W2PRM7 423 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 ORC5O43913 435 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 TMEM127O75204 238 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 IL1AP01583 271 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 ZNF626Q68DY1 528 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 FAM216AQ8WUB2 273 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 CLEC7AQ9BXN2 247 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 KCNK15Q9H427 330 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 ESM1Q9NQ30 184 aa20.98■□□□□ 0.95
TRIM28-204ENST00000594806 A0A087X0M5 115 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 IGHV2-26A0A0B4J1V2 119 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 TMEM272A0A1B0GTI8 110 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 MDFIC2A0A1B0GVS7 189 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 A0A1B0GX30 115 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 DNAJC9-AS1A6NH13 148 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 ODF3BA8MYP8 253 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 NPIPB11E5RHQ5 1161 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 AIREO43918 545 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 RAB6AP20340 208 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 CD34P28906 385 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 BLVRBP30043 206 aaPredicted RBP20.97■□□□□ 0.95
TRIM28-204ENST00000594806 SDC2P34741 201 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 UBA52P62987 128 aaKnown RBP20.97■□□□□ 0.95
TRIM28-204ENST00000594806 TRAT1Q6PIZ9 186 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 NR2C2APQ86WQ0 139 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 OR56B1Q8NGI3 324 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 MRGPRDQ8TDS7 321 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 SSMEM1Q8WWF3 244 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 CENPOQ9BU64 300 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 MRPS26Q9BYN8 205 aaKnown RBP20.97■□□□□ 0.95
TRIM28-204ENST00000594806 LIN7BQ9HAP6 207 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 HSF4Q9ULV5 492 aa20.97■□□□□ 0.95
TRIM28-204ENST00000594806 RNF212BA8MTL3 300 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 MMP23AO75900 390 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 ARG1P05089 322 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms