RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 OR14J1Q9UGF5 321 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 A0A1W2PP11 408 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 GLAP06280 429 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 ELK1P19419 428 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 FUT3P21217 361 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 BLVRBP30043 206 aaPredicted RBP12.69□□□□□ -0.38
FOXA3-202ENST00000594297 PRDX2P32119 198 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 TNFSF8P32971 234 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 MDH2P40926 338 aaKnown RBP12.69□□□□□ -0.38
FOXA3-202ENST00000594297 GABRA2P47869 451 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 PIGYQ3MUY2 71 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 ATAD3CQ5T2N8 411 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 TEX36Q5VZQ5 186 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 BTNL3Q6UXE8 466 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 Q6ZTK2 550 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 LAX1Q8IWV1 398 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 FAM89BQ8N5H3 189 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 OR10R2Q8NGX6 335 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 MED30Q96HR3 178 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 TSC22D3Q99576 134 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 DNTTIP1Q9H147 329 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 WDR13Q9H1Z4 485 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 KCNK15Q9H427 330 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 PLEKHJ1Q9NW61 149 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 RNF114Q9Y508 228 aa12.69□□□□□ -0.38
FOXA3-202ENST00000594297 RYR3Q15413 4870 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 RFPL4AA6NLU0 287 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 MCRIP1C9JLW8 97 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 RFPL4AL1F8VTS6 287 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 F8VVB4 439 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 F8VWA3 439 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
FOXA3-202ENST00000594297 XRCC3O43542 346 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 HAND1O96004 215 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 EIF4EP06730 217 aaKnown RBP12.68□□□□□ -0.38
FOXA3-202ENST00000594297 RPS2P15880 293 aaKnown RBP12.68□□□□□ -0.38
FOXA3-202ENST00000594297 PTBP1P26599 531 aaKnown RBP eCLIP12.68□□□□□ -0.38
FOXA3-202ENST00000594297 EFNB2P52799 333 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 ZNF45Q02386 682 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 IL18Q14116 193 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 RUSC1-AS1Q66K80 236 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 SFRP4Q6FHJ7 346 aaPredicted RBP12.68□□□□□ -0.38
FOXA3-202ENST00000594297 CNIH2Q6PI25 160 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 FAM131AQ6UXB0 335 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 SLC36A1Q7Z2H8 476 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 FAM110DQ8TAY7 271 aaPredicted RBP12.68□□□□□ -0.38
FOXA3-202ENST00000594297 NEK7Q8TDX7 302 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 SLC25A38Q96DW6 304 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 IFT22Q9H7X7 185 aa12.68□□□□□ -0.38
FOXA3-202ENST00000594297 MRPS7Q9Y2R9 242 aaKnown RBP12.68□□□□□ -0.38
FOXA3-202ENST00000594297 TRAV18A0A075B6X5 111 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 PDCD6O75340 191 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 MELTFP08582 738 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 WNT2P09544 360 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 PSG2P11465 335 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 CDK2P24941 298 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 DUSP1P28562 367 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 PDCD1Q15116 288 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 NKAPLQ5M9Q1 402 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 PYHIN1Q6K0P9 492 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 OR5D13Q8NGL4 314 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 MIXL1Q9H2W2 232 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 HSF4Q9ULV5 492 aa12.67□□□□□ -0.38
FOXA3-202ENST00000594297 IGHV3OR15-7A0A075B7D8 119 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 FUOMA2VDF0 154 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 SERPINE3A8MV23 424 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 GSTP1P09211 210 aaKnown RBP12.66□□□□□ -0.38
FOXA3-202ENST00000594297 KCNJ3P48549 501 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 PROK1P58294 105 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 GNB2P62879 340 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 MRPS10P82664 201 aaKnown RBP12.66□□□□□ -0.38
FOXA3-202ENST00000594297 ARFRP1Q13795 201 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 PNLIPRP3Q17RR3 467 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 BEAN1Q3B7T3 259 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 PAN3Q58A45 887 aaKnown RBP12.66□□□□□ -0.38
FOXA3-202ENST00000594297 Q6YL49 198 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 Q6ZPA2 131 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 DCDC5Q6ZRR9 648 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 NLRC3Q7RTR2 1065 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 TMEM86BQ8N661 226 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 ASCC1Q8N9N2 400 aaKnown RBP12.66□□□□□ -0.38
FOXA3-202ENST00000594297 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 OR5T2Q8NGG2 359 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 LINC01006Q8NI28 216 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 NICN1Q9BSH3 213 aa12.66□□□□□ -0.38
FOXA3-202ENST00000594297 WDR12Q9GZL7 423 aaKnown RBP12.66□□□□□ -0.38
FOXA3-202ENST00000594297 G3V4G9 280 aa12.65□□□□□ -0.38
FOXA3-202ENST00000594297 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.65□□□□□ -0.38
FOXA3-202ENST00000594297 RAB27BO00194 218 aa12.65□□□□□ -0.38
FOXA3-202ENST00000594297 SIRPB1O00241 398 aa12.65□□□□□ -0.38
FOXA3-202ENST00000594297 SOCS1O15524 211 aa12.65□□□□□ -0.38
FOXA3-202ENST00000594297 CA11O75493 328 aa12.65□□□□□ -0.38
FOXA3-202ENST00000594297 ZNF205O95201 554 aa12.65□□□□□ -0.38
FOXA3-202ENST00000594297 OR2H2O95918 312 aa12.65□□□□□ -0.38
FOXA3-202ENST00000594297 GYPAP02724 150 aa12.65□□□□□ -0.38
FOXA3-202ENST00000594297 PRB2P02812 416 aaPredicted RBP12.65□□□□□ -0.38
FOXA3-202ENST00000594297 CD3GP09693 182 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms