RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DGCR2P98153 550 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 ZNF695Q8IW36 515 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 FOXRED2Q8IWF2 684 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 PARP16Q8N5Y8 322 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 COMMD1Q8N668 190 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 ACBD7Q8N6N7 88 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 HAVCR2Q8TDQ0 301 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 TRUB1Q8WWH5 349 aaKnown RBP12.87□□□□□ -0.35
LIG1-205ENST00000593425 CENPNQ96H22 339 aaPredicted RBP12.87□□□□□ -0.35
LIG1-205ENST00000593425 RAX2Q96IS3 184 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 ZNF581Q9P0T4 197 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 IGHV3-72A0A0B4J1Y9 119 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 HSD17B6O14756 317 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 ZFPL1O95159 310 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 REG1BP48304 166 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 LUMP51884 338 aaPredicted RBP12.86□□□□□ -0.35
LIG1-205ENST00000593425 RAB25P57735 213 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 DCTN2Q13561 401 aaKnown RBP12.86□□□□□ -0.35
LIG1-205ENST00000593425 IL13RA2Q14627 380 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 PIGYQ3MUY2 71 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 SLC25A30Q5SVS4 291 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 C1orf146Q5VVC0 180 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 UNQ9370/PRO34162Q6UXP9 181 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 LCNL1Q6ZST4 164 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 LHFPL3Q86UP9 236 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 SERPINA12Q8IW75 414 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 PXT1Q8NFP0 134 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 OR51A2Q8NGJ7 313 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 OR10K1Q8NGX5 313 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 LGALS12Q96DT0 336 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 ALG8Q9BVK2 526 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 BARHL1Q9BZE3 327 aa12.86□□□□□ -0.35
LIG1-205ENST00000593425 ISG20L2Q9H9L3 353 aaKnown RBP12.86□□□□□ -0.35
LIG1-205ENST00000593425 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
LIG1-205ENST00000593425 E9PI62 339 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 CCL24O00175 119 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 RPLP1P05386 114 aaKnown RBP12.85□□□□□ -0.35
LIG1-205ENST00000593425 SNRPGP62308 76 aaKnown RBP12.85□□□□□ -0.35
LIG1-205ENST00000593425 PAX5Q02548 391 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 ZNF816Q0VGE8 651 aaPredicted RBP12.85□□□□□ -0.35
LIG1-205ENST00000593425 EBI3Q14213 229 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 Q8N6K4 173 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 OR5D14Q8NGL3 314 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 OR10X1Q8NGY0 326 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 TNFAIP8L1Q8WVP5 186 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 EAF1Q96JC9 268 aaPredicted RBP12.85□□□□□ -0.35
LIG1-205ENST00000593425 PDCD1LG2Q9BQ51 273 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 DHDHQ9UQ10 334 aa12.85□□□□□ -0.35
LIG1-205ENST00000593425 IGHV1-3A0A0C4DH29 117 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 GPR12P47775 334 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 GALEQ14376 348 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 NKAPLQ5M9Q1 402 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 FAM53AQ6NSI3 398 aaPredicted RBP12.84□□□□□ -0.35
LIG1-205ENST00000593425 TEX38Q6PEX7 206 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 MOB3BQ86TA1 216 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 SATL1Q86VE3 508 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 Q8N9W7 124 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 OR10A7Q8NGE5 316 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 TSEN15Q8WW01 171 aaKnown RBP12.84□□□□□ -0.35
LIG1-205ENST00000593425 PRR25Q96S07 402 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 GPER1Q99527 375 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 FAM192AQ9GZU8 254 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 DCLRE1BQ9H816 532 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 LSM4Q9Y4Z0 139 aaKnown RBP12.84□□□□□ -0.35
LIG1-205ENST00000593425 U3KQK5 164 aa12.84□□□□□ -0.35
LIG1-205ENST00000593425 NCBP2LA6PVI3 153 aaKnown RBP12.83□□□□□ -0.36
LIG1-205ENST00000593425 AP4M1O00189 453 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 CCRL2O00421 344 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 EI24O14681 340 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 RAMP3O60896 148 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 ALPLP05186 524 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 KCNJ3P48549 501 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 ZIK1Q3SY52 487 aaPredicted RBP12.83□□□□□ -0.36
LIG1-205ENST00000593425 ZNF529Q6P280 563 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 SLC16A12Q6ZSM3 486 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 TGIF2LXQ8IUE1 241 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 IZUMO1Q8IYV9 350 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 SYS1Q8N2H4 156 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 SUMF2Q8NBJ7 301 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 Q8NFD4 153 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 OR5AK2Q8NH90 309 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 UBALD1Q8TB05 177 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 RGP1Q92546 391 aaPredicted RBP12.83□□□□□ -0.36
LIG1-205ENST00000593425 RBMXL1Q96E39 390 aaKnown RBP12.83□□□□□ -0.36
LIG1-205ENST00000593425 DPCDQ9BVM2 203 aaPredicted RBP12.83□□□□□ -0.36
LIG1-205ENST00000593425 ABCG5Q9H222 651 aa12.83□□□□□ -0.36
LIG1-205ENST00000593425 LIN7CQ9NUP9 197 aaKnown RBP12.83□□□□□ -0.36
LIG1-205ENST00000593425 TMEM212A6NML5 194 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 HTR3BO95264 441 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 GAPDHP04406 335 aaKnown RBP12.82□□□□□ -0.36
LIG1-205ENST00000593425 GABRB1P18505 474 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 RAB3AP20336 220 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 SOX2P48431 317 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 RSU1Q15404 277 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 PNLIPRP3Q17RR3 467 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 ASCL4Q6XD76 172 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 OR8U1Q8NH10 309 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms