RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 GTF2A1P52655 376 aaPredicted RBP16.23■□□□□ 0.19
TRIM47-207ENST00000593089 KRTAP10-11P60412 298 aa16.23■□□□□ 0.19
TRIM47-207ENST00000593089 MRPL28Q13084 256 aaKnown RBP16.23■□□□□ 0.19
TRIM47-207ENST00000593089 MADCAM1Q13477 382 aa16.23■□□□□ 0.19
TRIM47-207ENST00000593089 HNF4GQ14541 408 aa16.23■□□□□ 0.19
TRIM47-207ENST00000593089 IL13RA2Q14627 380 aa16.23■□□□□ 0.19
TRIM47-207ENST00000593089 RSU1Q15404 277 aa16.23■□□□□ 0.19
TRIM47-207ENST00000593089 RSBN1Q5VWQ0 802 aaPredicted RBP16.23■□□□□ 0.19
TRIM47-207ENST00000593089 Q96MT0 163 aa16.23■□□□□ 0.19
TRIM47-207ENST00000593089 NCOR1P1Q9H4R4 102 aa16.23■□□□□ 0.19
TRIM47-207ENST00000593089 TAS2R4Q9NYW5 299 aa16.23■□□□□ 0.19
TRIM47-207ENST00000593089 MPZL2O60487 215 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 HTR3BO95264 441 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 HOXD3P31249 432 aaPredicted RBP16.22■□□□□ 0.19
TRIM47-207ENST00000593089 SSTR5P35346 364 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 RAB40BQ12829 278 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 DEFB121Q5J5C9 76 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 C5orf56Q8N8D9 126 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 LINC00482Q8N8I6 264 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 OR52I1Q8NGK6 324 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 RHOXF1Q8NHV9 184 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 NOL4LQ96MY1 436 aaPredicted RBP16.22■□□□□ 0.19
TRIM47-207ENST00000593089 JAM3Q9BX67 310 aa16.22■□□□□ 0.19
TRIM47-207ENST00000593089 A0A1W2PPE3 182 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 WI2-2373I1.2A0A1W2PRP0 233 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 NPIPB11E5RHQ5 1161 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 RAB7AP51149 207 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 ZNF529Q6P280 563 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 ZFP1Q6P2D0 407 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 ETV3LQ6ZN32 361 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 MRPL41Q8IXM3 137 aaKnown RBP16.21■□□□□ 0.19
TRIM47-207ENST00000593089 HAVCR2Q8TDQ0 301 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 RGP1Q92546 391 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-207ENST00000593089 LINC00574Q9H8X3 128 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 ZNF581Q9P0T4 197 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 LINC00527Q9UJ94 153 aa16.21■□□□□ 0.19
TRIM47-207ENST00000593089 SERPINE3A8MV23 424 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 CDRT1O95170 752 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 IGKV1D-33P01593 117 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 IGKV1-33P01594 117 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 KCNJ3P48549 501 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 RPL23AP62750 156 aaKnown RBP16.2■□□□□ 0.18
TRIM47-207ENST00000593089 OR8H3Q8N146 312 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 SUMF2Q8NBJ7 301 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 OR51D1Q8NGF3 324 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 OR10X1Q8NGY0 326 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 CHPT1Q8WUD6 406 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 DPCDQ9BVM2 203 aaPredicted RBP16.2■□□□□ 0.18
TRIM47-207ENST00000593089 ING4Q9UNL4 249 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 ST3GAL6Q9Y274 331 aa16.2■□□□□ 0.18
TRIM47-207ENST00000593089 RPL36Q9Y3U8 105 aaKnown RBP16.2■□□□□ 0.18
TRIM47-207ENST00000593089 LOC100130705A0A1B0GUX0 176 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 PAX5Q02548 391 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 XAF1Q6GPH4 301 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 ASCL4Q6XD76 172 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 C18orf65Q6ZTR6 163 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 Q8NFD4 153 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 OR10A7Q8NGE5 316 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 SLC29A1Q99808 456 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 C9orf16Q9BUW7 83 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 FAM118AQ9NWS6 357 aa16.19■□□□□ 0.18
TRIM47-207ENST00000593089 NUDT19A8MXV4 375 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 HSD17B6O14756 317 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 FGF16O43320 207 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 OR7C1O76099 320 aaPredicted RBP16.18■□□□□ 0.18
TRIM47-207ENST00000593089 CD2P06729 351 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 LIMS3P0CW19 117 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 LIMS4P0CW20 117 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 THBS3P49746 956 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 KLHL22Q53GT1 634 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 VAX1Q5SQQ9 334 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 SLC16A12Q6ZSM3 486 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 C8orf86Q6ZUL3 223 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 OR2W3Q7Z3T1 314 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 SLC35E3Q7Z769 313 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 MOB3BQ86TA1 216 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 GPR148Q8TDV2 347 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 APH1BQ8WW43 257 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 DPF1Q92782 380 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 METTL9Q9H1A3 318 aa16.18■□□□□ 0.18
TRIM47-207ENST00000593089 MRPS18AQ9NVS2 196 aaKnown RBP16.18■□□□□ 0.18
TRIM47-207ENST00000593089 CSTBP04080 98 aaKnown RBP16.17■□□□□ 0.18
TRIM47-207ENST00000593089 REG1BP48304 166 aa16.17■□□□□ 0.18
TRIM47-207ENST00000593089 EGFEM1PQ0D2K5 195 aa16.17■□□□□ 0.18
TRIM47-207ENST00000593089 DDI2Q5TDH0 399 aa16.17■□□□□ 0.18
TRIM47-207ENST00000593089 C11orf87Q6NUJ2 197 aa16.17■□□□□ 0.18
TRIM47-207ENST00000593089 UBALD1Q8TB05 177 aa16.17■□□□□ 0.18
TRIM47-207ENST00000593089 TMEM106AQ96A25 262 aa16.17■□□□□ 0.18
TRIM47-207ENST00000593089 GPR61Q9BZJ8 451 aa16.17■□□□□ 0.18
TRIM47-207ENST00000593089 IGHV3-72A0A0B4J1Y9 119 aa16.16■□□□□ 0.18
TRIM47-207ENST00000593089 CCRL2O00421 344 aa16.16■□□□□ 0.18
TRIM47-207ENST00000593089 GEMIN2O14893 280 aaKnown RBP16.16■□□□□ 0.18
TRIM47-207ENST00000593089 SERPINA2P20848 420 aa16.16■□□□□ 0.18
TRIM47-207ENST00000593089 ZNF93P35789 620 aaPredicted RBP16.16■□□□□ 0.18
TRIM47-207ENST00000593089 RBM11P57052 281 aaKnown RBP16.16■□□□□ 0.18
TRIM47-207ENST00000593089 PPP3R1P63098 170 aa16.16■□□□□ 0.18
TRIM47-207ENST00000593089 SLC35B1P78383 322 aa16.16■□□□□ 0.18
TRIM47-207ENST00000593089 SMN1Q16637 294 aaKnown RBP16.16■□□□□ 0.18
TRIM47-207ENST00000593089 RPL22L1Q6P5R6 122 aaKnown RBP16.16■□□□□ 0.18
TRIM47-207ENST00000593089 FOXRED2Q8IWF2 684 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms