RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 FAAP24Q9BTP7 215 aa15.73■□□□□ 0.11
DDX39A-214ENST00000590556 ATG5Q9H1Y0 275 aa15.73■□□□□ 0.11
DDX39A-214ENST00000590556 OR6C3Q9NZP0 311 aa15.73■□□□□ 0.11
DDX39A-214ENST00000590556 CEPT1Q9Y6K0 416 aa15.73■□□□□ 0.11
DDX39A-214ENST00000590556 FOXI3A8MTJ6 420 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-214ENST00000590556 DLX6P56179 175 aa15.72■□□□□ 0.11
DDX39A-214ENST00000590556 SPCS2Q15005 226 aa15.72■□□□□ 0.11
DDX39A-214ENST00000590556 ZNF497Q6ZNH5 498 aa15.72■□□□□ 0.11
DDX39A-214ENST00000590556 Q6ZTK2 550 aa15.72■□□□□ 0.11
DDX39A-214ENST00000590556 ZNF565Q8N9K5 539 aa15.72■□□□□ 0.11
DDX39A-214ENST00000590556 ISOC1Q96CN7 298 aa15.72■□□□□ 0.11
DDX39A-214ENST00000590556 KCTD12Q96CX2 325 aaKnown RBP15.72■□□□□ 0.11
DDX39A-214ENST00000590556 METTL8Q9H825 291 aaKnown RBP15.72■□□□□ 0.11
DDX39A-214ENST00000590556 HSF4Q9ULV5 492 aa15.72■□□□□ 0.11
DDX39A-214ENST00000590556 SPATA2Q9UM82 520 aa15.72■□□□□ 0.11
DDX39A-214ENST00000590556 ANK3Q12955 4377 aaKnown RBP15.71■□□□□ 0.11
DDX39A-214ENST00000590556 NAV3Q8IVL0 2385 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 CCDC160A6NGH7 325 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 C17orf98A8MV24 154 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 CRLF1O75462 422 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 CA11O75493 328 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 MT-ND4P03905 459 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 GLP1RP43220 463 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 TMEM50BP56557 158 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 OR10R2Q8NGX6 335 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 DYRK2Q92630 601 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 RAB3CQ96E17 227 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 ARHGAP5-AS1Q96IT6 56 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 CYYR1Q96J86 154 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 PECRQ9BY49 303 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 GAL3ST2Q9H3Q3 398 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 SIRT7Q9NRC8 400 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 RHBDL2Q9NX52 303 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 TAS2R3Q9NYW6 316 aa15.71■□□□□ 0.11
DDX39A-214ENST00000590556 H3BMQ9 156 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 RAB27BO00194 218 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 SRD5A1P18405 259 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 PRTN3P24158 256 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 MOGAT2Q3SYC2 334 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 KLF17Q5JT82 389 aaPredicted RBP15.7■□□□□ 0.1
DDX39A-214ENST00000590556 PLAC9Q5JTB6 97 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 RTN4RL2Q86UN3 420 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 C11orf42Q8N5U0 333 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 OR13A1Q8NGR1 328 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 MRGPRDQ8TDS7 321 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 CCDC107Q8WV48 283 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 LHX4Q969G2 390 aa15.7■□□□□ 0.1
DDX39A-214ENST00000590556 UNKLQ9H9P5 680 aaKnown RBP15.7■□□□□ 0.1
DDX39A-214ENST00000590556 NIPBLQ6KC79 2804 aaeCLIP15.69■□□□□ 0.1
DDX39A-214ENST00000590556 IGHV3OR16-10A0A075B7F0 116 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 TRAV39A0A0B4J263 110 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 TRAV40A0A0B4J280 105 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 ZNF729A6NN14 1252 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-214ENST00000590556 SCGNO76038 276 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 FSHBP01225 129 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 RBP4P02753 201 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 ZNF182P17025 639 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-214ENST00000590556 DLX1P56177 255 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 ERVFRD-1P60508 538 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 PRB3Q04118 309 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-214ENST00000590556 GPR157Q5UAW9 335 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 GAPTQ8N292 157 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 OR4K15Q8NH41 348 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 ACOT12Q8WYK0 555 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 AP3S1Q92572 193 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 PHF21AQ96BD5 680 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 SLC25A38Q96DW6 304 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 AK3Q9UIJ7 227 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 NUP50Q9UKX7 468 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 TRAPPC2LQ9UL33 140 aa15.69■□□□□ 0.1
DDX39A-214ENST00000590556 IGHV4-38-2P0DP08 117 aa15.68■□□□□ 0.1
DDX39A-214ENST00000590556 GZMHP20718 246 aa15.68■□□□□ 0.1
DDX39A-214ENST00000590556 SOX6P35712 828 aa15.68■□□□□ 0.1
DDX39A-214ENST00000590556 NCR3LG1Q68D85 454 aa15.68■□□□□ 0.1
DDX39A-214ENST00000590556 SAMD12Q8N8I0 201 aa15.68■□□□□ 0.1
DDX39A-214ENST00000590556 TNFRSF14Q92956 283 aa15.68■□□□□ 0.1
DDX39A-214ENST00000590556 HEXA-AS1Q9H8Q6 139 aa15.68■□□□□ 0.1
DDX39A-214ENST00000590556 CHMP1AQ9HD42 196 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-214ENST00000590556 CALYQ9NYX4 217 aa15.68■□□□□ 0.1
DDX39A-214ENST00000590556 SETD2Q9BYW2 2564 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-214ENST00000590556 A0A075B6Q4 140 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 CENPVL3A0A0U1RRI6 287 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 KBTBD11-OT1A0A1B0GTJ5 212 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 CLPXO76031 633 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 CGB3P0DN86 165 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 CGB7P0DN87 165 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 IGHV1-8P0DP01 117 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 HIST1H1DP16402 221 aaKnown RBP15.67■□□□□ 0.1
DDX39A-214ENST00000590556 GNB3P16520 340 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 HOXB4P17483 251 aaPredicted RBP15.67■□□□□ 0.1
DDX39A-214ENST00000590556 DYNC1I2Q13409 638 aaKnown RBP15.67■□□□□ 0.1
DDX39A-214ENST00000590556 C17orf58Q2M2W7 97 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 UBE2NLQ5JXB2 153 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 PRAMEF5Q5TYX0 476 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 ZNF782Q6ZMW2 699 aaPredicted RBP15.67■□□□□ 0.1
DDX39A-214ENST00000590556 PDZD9Q8IXQ8 264 aa15.67■□□□□ 0.1
DDX39A-214ENST00000590556 MRPL30Q8TCC3 161 aaKnown RBP15.67■□□□□ 0.1
DDX39A-214ENST00000590556 RBM38Q9H0Z9 239 aaKnown RBP15.67■□□□□ 0.1
DDX39A-214ENST00000590556 RIMS4Q9H426 269 aaPredicted RBP15.67■□□□□ 0.1
DDX39A-214ENST00000590556 COMMD3Q9UBI1 195 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms