RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GPR173Q9NS66 373 aa4.84□□□□□ -1.63
VPS25-204ENST00000589577 TXNL4BQ9NX01 149 aaKnown RBP4.84□□□□□ -1.63
VPS25-204ENST00000589577 TAS2R4Q9NYW5 299 aa4.84□□□□□ -1.63
VPS25-204ENST00000589577 ZNF319Q9P2F9 582 aa4.84□□□□□ -1.63
VPS25-204ENST00000589577 RNF7Q9UBF6 113 aa4.84□□□□□ -1.63
VPS25-204ENST00000589577 RSL24D1Q9UHA3 163 aaKnown RBP4.84□□□□□ -1.63
VPS25-204ENST00000589577 GLS2Q9UI32 602 aa4.84□□□□□ -1.63
VPS25-204ENST00000589577 RHBDD3Q9Y3P4 386 aa4.84□□□□□ -1.63
VPS25-204ENST00000589577 SIRT4Q9Y6E7 314 aaPredicted RBP4.84□□□□□ -1.63
VPS25-204ENST00000589577 TRBV5-7A0A0A0MS05 114 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 TRAV38-1A0A0B4J264 116 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 A0A1W2PPK0 400 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ZNF732B4DXR9 585 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 J3QT63 122 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ZNF701M0R085 212 aaPredicted RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 F2RL2O00254 374 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ZNF780AO75290 641 aaPredicted RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 KDM4BO94953 1096 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 IL1AP01583 271 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 IGLV3-1P01715 115 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ALDOBP05062 364 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 GRPP07492 148 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 UBBP0CG47 229 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 TMEM225BP0DP42 221 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ACKR3P25106 362 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 HAAOP46952 286 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 GPM6AP51674 278 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 LSM3P62310 102 aaKnown RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 MXD1Q05195 221 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 RSU1Q15404 277 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 RAB11BQ15907 218 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ARSJQ5FYB0 599 aaPredicted RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 CEP78Q5JTW2 689 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 LDLRAD2Q5SZI1 272 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 TEX36Q5VZQ5 186 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 AWAT2Q6E213 333 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 MZT2AQ6P582 158 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 CD200R1LQ6Q8B3 271 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 Q6ZSR3 168 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ZNF826PQ6ZT77 177 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 C8orf86Q6ZUL3 223 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 LHFPL4Q7Z7J7 247 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 CENPVQ7Z7K6 275 aaPredicted RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 MKXQ8IYA7 352 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 Q8IYB0 196 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 RPP25LQ8N5L8 163 aaKnown RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 RGP1Q92546 391 aaPredicted RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 DGCR14Q96DF8 476 aaKnown RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 YIPF6Q96EC8 236 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ADAT3Q96EY9 351 aaPredicted RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 DUX3Q96PT4 197 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 CCL13Q99616 98 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 UQCC2Q9BRT2 126 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 CST11Q9H112 138 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 OR51E2Q9H255 320 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 DCSTAMPQ9H295 470 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 GHRLQ9UBU3 117 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ADAM30Q9UKF2 790 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 ZNF256Q9Y2P7 627 aaPredicted RBP4.83□□□□□ -1.64
VPS25-204ENST00000589577 V9GY05 133 aa4.83□□□□□ -1.64
VPS25-204ENST00000589577 VPS13DQ5THJ4 4388 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 A6NIN4 97 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A8PA6NJQ4 464 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 NOTOA8MTQ0 251 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 M0R1W7 72 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 GPX5O75715 221 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 SC5DO75845 299 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 SCGNO76038 276 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 NXPH2O95156 264 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 CDRT1O95170 752 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 SNRNP70P08621 437 aaKnown RBP4.82□□□□□ -1.64
VPS25-204ENST00000589577 HTR2CP28335 458 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 S100A5P33763 92 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 SDC2P34741 201 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 RORCP51449 518 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 VBP1P61758 197 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 RPS11P62280 158 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS25-204ENST00000589577 KISS1Q15726 138 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 DGUOKQ16854 277 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 SMIM21Q3B7S5 101 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 TMEM42Q69YG0 159 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 HAGHLQ6PII5 290 aaPredicted RBP4.82□□□□□ -1.64
VPS25-204ENST00000589577 OR51D1Q8NGF3 324 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 OR4X2Q8NGF9 303 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 OR51A2Q8NGJ7 313 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 OR6M1Q8NGM8 313 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 TNFAIP8L1Q8WVP5 186 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 ACOT12Q8WYK0 555 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 OR5P3Q8WZ94 311 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 SEH1LQ96EE3 360 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 URM1Q9BTM9 101 aaKnown RBP4.82□□□□□ -1.64
VPS25-204ENST00000589577 CENPOQ9BU64 300 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 PKIBQ9C010 78 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 METTL9Q9H1A3 318 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 RHOFQ9HBH0 211 aa4.82□□□□□ -1.64
VPS25-204ENST00000589577 MRPS28Q9Y2Q9 187 aaKnown RBP4.82□□□□□ -1.64
VPS25-204ENST00000589577 SF3B6Q9Y3B4 125 aaKnown RBP4.82□□□□□ -1.64
VPS25-204ENST00000589577 AK6Q9Y3D8 172 aaKnown RBP4.82□□□□□ -1.64
VPS25-204ENST00000589577 TRAV8-7A0A075B6U6 113 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms