RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZNF714Q96N38 554 aa16.12■□□□□ 0.17
CIRBP-220ENST00000588917 GAL3ST2Q9H3Q3 398 aa16.12■□□□□ 0.17
CIRBP-220ENST00000588917 RIMS4Q9H426 269 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-220ENST00000588917 RSL24D1Q9UHA3 163 aaKnown RBP16.12■□□□□ 0.17
CIRBP-220ENST00000588917 CDC42EP3Q9UKI2 254 aa16.12■□□□□ 0.17
CIRBP-220ENST00000588917 MALRD1Q5VYJ5 2156 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 A0A0A6YYD4 124 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 A0A0A6YYH2 397 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 UBE2QL1A1L167 161 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 A6NJ64 397 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 POM121CA8CG34 1229 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 H3BMQ9 156 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 ZNF728P0DKX0 622 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 TMEM50BP56557 158 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 SPCS2Q15005 226 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 RSBN1Q5VWQ0 802 aaPredicted RBP16.11■□□□□ 0.17
CIRBP-220ENST00000588917 ZNF497Q6ZNH5 498 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 TPRX1Q8N7U7 411 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 NANPQ8TBE9 248 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 S100A16Q96FQ6 103 aaKnown RBP16.11■□□□□ 0.17
CIRBP-220ENST00000588917 COQ2Q96H96 371 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 FAAP24Q9BTP7 215 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 BEX2Q9BXY8 128 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 METTL8Q9H825 291 aaKnown RBP16.11■□□□□ 0.17
CIRBP-220ENST00000588917 RAB9BQ9NP90 201 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 DIABLOQ9NR28 239 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 RHBDL2Q9NX52 303 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 ING3Q9NXR8 418 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 ZNF581Q9P0T4 197 aa16.11■□□□□ 0.17
CIRBP-220ENST00000588917 FOXI3A8MTJ6 420 aaPredicted RBP16.1■□□□□ 0.17
CIRBP-220ENST00000588917 CRLF1O75462 422 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 MT-ND4P03905 459 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 METAP1DQ6UB28 335 aaPredicted RBP16.1■□□□□ 0.17
CIRBP-220ENST00000588917 C6orf201Q7Z4U5 140 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 GAPTQ8N292 157 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 PLPPR1Q8TBJ4 325 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 UPRTQ96BW1 309 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 DGCR14Q96DF8 476 aaKnown RBP16.1■□□□□ 0.17
CIRBP-220ENST00000588917 PCGF1Q9BSM1 259 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 SIRPDQ9H106 197 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 UNKLQ9H9P5 680 aaKnown RBP16.1■□□□□ 0.17
CIRBP-220ENST00000588917 OPN4Q9UHM6 478 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 KIF25Q9UIL4 384 aa16.1■□□□□ 0.17
CIRBP-220ENST00000588917 ZNF729A6NN14 1252 aaPredicted RBP16.09■□□□□ 0.17
CIRBP-220ENST00000588917 C17orf98A8MV24 154 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 RAB27BO00194 218 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 PRTN3P24158 256 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 BPIFB3P59826 476 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 MRPS15P82914 257 aaKnown RBP16.09■□□□□ 0.17
CIRBP-220ENST00000588917 PLA2G7Q13093 441 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 SCGB2A2Q13296 93 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 UBE2NLQ5JXB2 153 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 TRAT1Q6PIZ9 186 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 OR5H6Q8NGV6 325 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 SPATA3Q8NHX4 192 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 ARHGAP5-AS1Q96IT6 56 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 SULT4A1Q9BR01 284 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 PECRQ9BY49 303 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 RBM38Q9H0Z9 239 aaKnown RBP16.09■□□□□ 0.17
CIRBP-220ENST00000588917 ABCG5Q9H222 651 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 HEXA-AS1Q9H8Q6 139 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 TRAPPC2LQ9UL33 140 aa16.09■□□□□ 0.17
CIRBP-220ENST00000588917 FBN1P35555 2871 aaKnown RBP16.09■□□□□ 0.17
CIRBP-220ENST00000588917 SERPINE3A8MV23 424 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 MMP9P14780 707 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 SRP14P37108 136 aaKnown RBP16.08■□□□□ 0.16
CIRBP-220ENST00000588917 ERVFRD-1P60508 538 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 ZNF273Q14593 569 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 NCR3LG1Q68D85 454 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 OR52W1Q6IF63 320 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 SAMD12Q8N8I0 201 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 DYNC2LI1Q8TCX1 351 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 CCDC59Q9P031 241 aaKnown RBP16.08■□□□□ 0.16
CIRBP-220ENST00000588917 COMMD3Q9UBI1 195 aa16.08■□□□□ 0.16
CIRBP-220ENST00000588917 DOCK11Q5JSL3 2073 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 SONP18583 2426 aaKnown RBP16.07■□□□□ 0.16
CIRBP-220ENST00000588917 ORC5O43913 435 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 AVPP01185 164 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 CCL3L1P16619 93 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 GUCA2AQ02747 115 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 CHRFAM7AQ494W8 412 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 PLAC9Q5JTB6 97 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 C6orf183Q5T699 404 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 VMO1Q7Z5L0 202 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 ZNF554Q86TJ5 538 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 Q8N7P7 452 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 OR10A7Q8NGE5 316 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.07■□□□□ 0.16
CIRBP-220ENST00000588917 KCNIP1Q9NZI2 227 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 MGAT4AQ9UM21 535 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 ABCA1O95477 2261 aa16.07■□□□□ 0.16
CIRBP-220ENST00000588917 KBTBD11-OT1A0A1B0GTJ5 212 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 APOA1P02647 267 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 GSTP1P09211 210 aaKnown RBP16.06■□□□□ 0.16
CIRBP-220ENST00000588917 CGB3P0DN86 165 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 CGB7P0DN87 165 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 HIST1H1DP16402 221 aaKnown RBP16.06■□□□□ 0.16
CIRBP-220ENST00000588917 GLP1RP43220 463 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 DLX6P56179 175 aa16.06■□□□□ 0.16
CIRBP-220ENST00000588917 MOGAT2Q3SYC2 334 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 924.7 ms