RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 C5orf24Q7Z6I8 188 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 ERGIC1Q969X5 290 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 RANBP3Q9H6Z4 567 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-204ENST00000587339 WIPI2Q9Y4P8 454 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 OR2A4O95047 310 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 LHBP01229 141 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 CTSDP07339 412 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-204ENST00000587339 ADH4P08319 380 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 ZNF728P0DKX0 622 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 UQCRFS1P47985 274 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 H2BFSP57053 126 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 COL10A1Q03692 680 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 TLE1Q04724 770 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 BEX5Q5H9J7 111 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 OR4A4PQ8NGN8 299 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 OR2T35Q8NGX2 323 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 NEUROG1Q92886 237 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 MOB3AQ96BX8 217 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 HYLS1Q96M11 299 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 OR2A7Q96R45 310 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 FXYD6Q9H0Q3 95 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 CLEC4MQ9H2X3 399 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-204ENST00000587339 MGAT4AQ9UM21 535 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 PPYP01298 95 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 TFF1P04155 84 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 PSG2P11465 335 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 GNLYP22749 145 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 PRDX2P32119 198 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 HERV-K104P61576 105 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 HLA-DRB3P79483 266 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 CCL8P80075 99 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 GALNT11Q8NCW6 608 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 ZNF486Q96H40 463 aaPredicted RBP16.67■□□□□ 0.26
TRIM47-204ENST00000587339 RNF7Q9UBF6 113 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 RNF115Q9Y4L5 304 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 ICE1Q9Y2F5 2266 aa16.67■□□□□ 0.26
TRIM47-204ENST00000587339 SIX6O95475 246 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 TNFRSF1AP19438 455 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 AADACP22760 399 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 RAP2BP61225 183 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 TFF3Q07654 80 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 C4orf17Q53FE4 359 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 CLEC18BQ6UXF7 455 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 CD177Q8N6Q3 437 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 ASCC1Q8N9N2 400 aaKnown RBP16.66■□□□□ 0.26
TRIM47-204ENST00000587339 PIPOXQ9P0Z9 390 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 PCDHB10Q9UN67 800 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 PPP1R3CQ9UQK1 317 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 IGKV1-6A0A0C4DH72 117 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 TMEM30CPA0ZSE6 113 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 SFT2D2O95562 160 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 DIRAS3O95661 229 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 CD55P08174 381 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 APOBEC3AP31941 199 aaPredicted RBP16.66■□□□□ 0.26
TRIM47-204ENST00000587339 KCNJ3P48549 501 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 SUPT4H1P63272 117 aaKnown RBP16.66■□□□□ 0.26
TRIM47-204ENST00000587339 LIN54Q6MZP7 749 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 ZCCHC24Q8N2G6 241 aaKnown RBP16.66■□□□□ 0.26
TRIM47-204ENST00000587339 MBNL3Q9NUK0 354 aaKnown RBP16.66■□□□□ 0.26
TRIM47-204ENST00000587339 METRNQ9UJH8 293 aa16.66■□□□□ 0.26
TRIM47-204ENST00000587339 SMG1Q96Q15 3661 aaKnown RBP16.65■□□□□ 0.26
TRIM47-204ENST00000587339 IGKV1D-17A0A075B6S4 117 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 TRAV39A0A0B4J263 110 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 OR3A1P47881 315 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 UCP3P55916 312 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 AESQ08117 197 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 ABCA11PQ4W5N1 156 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 SLC35E4Q6ICL7 350 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 OR11L1Q8NGX0 322 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 Q8TCH9 128 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 KIRREL1Q96J84 757 aa16.65■□□□□ 0.26
TRIM47-204ENST00000587339 DIDO1Q9BTC0 2240 aaKnown RBP16.65■□□□□ 0.26
TRIM47-204ENST00000587339 IGHV3OR15-7A0A075B7D8 119 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 PLAUP00749 431 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 IRF2P14316 349 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 DNASE1P24855 282 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 TESK1Q15569 626 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 SLC9A3R2Q15599 337 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 FAM209AQ5JX71 171 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 DCAF12L2Q5VW00 463 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 KCTD9Q7L273 389 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 SGPP2Q8IWX5 399 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 SLC38A6Q8IZM9 456 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 PRR18Q8N4B5 295 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 OR10J5Q8NHC4 309 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 IL1F10Q8WWZ1 152 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 SEBOXQ9HB31 216 aaPredicted RBP16.64■□□□□ 0.26
TRIM47-204ENST00000587339 CISD1Q9NZ45 108 aaKnown RBP16.64■□□□□ 0.26
TRIM47-204ENST00000587339 OPN4Q9UHM6 478 aa16.64■□□□□ 0.26
TRIM47-204ENST00000587339 SIAH2O43255 324 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 RPS2P15880 293 aaKnown RBP16.64■□□□□ 0.25
TRIM47-204ENST00000587339 GABRA2P47869 451 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 PIGPP57054 158 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 LPCAT3Q6P1A2 487 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 OR5M8Q8NGP6 311 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 CABLES2Q9BTV7 478 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 EGLN1Q9GZT9 426 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 SHARPINQ9H0F6 387 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 MS4A5Q9H3V2 200 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 DYNLRB1Q9NP97 96 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms