RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SGMS2Q8NHU3 365 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 ZNF418Q8TF45 676 aaPredicted RBP6.56□□□□□ -1.36
VMP1-204ENST00000587259 FAM216AQ8WUB2 273 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 GIMAP1Q8WWP7 306 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 ST8SIA4Q92187 359 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 ARHGAP5-AS1Q96IT6 56 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 RNF170Q96K19 258 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 GINS4Q9BRT9 223 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 NICN1Q9BSH3 213 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 ADAT1Q9BUB4 502 aaKnown RBP6.56□□□□□ -1.36
VMP1-204ENST00000587259 TMPRSS13Q9BYE2 586 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 ALX4Q9H161 411 aaPredicted RBP6.56□□□□□ -1.36
VMP1-204ENST00000587259 DUSP13Q9UII6 198 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 GPR160Q9UJ42 338 aa6.56□□□□□ -1.36
VMP1-204ENST00000587259 TRRAPQ9Y4A5 3859 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 IGKV1-27A0A075B6S5 117 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 A0A0A6YYD4 124 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 A0A0A6YYJ9 748 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 TRIM77I1YAP6 450 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 ARPC1BO15143 372 aaKnown RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 SOCS1O15524 211 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 SSNA1O43805 119 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 FCER2P06734 321 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 ACAA1P09110 424 aaPredicted RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 ANXA3P12429 323 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 AMY2BP19961 511 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 GABRR1P24046 479 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 OR3A3P47888 321 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 GPM6AP51674 278 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 SELENOVP59797 346 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 RBM39Q14498 530 aaKnown RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 HLXQ14774 488 aaPredicted RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 SURF2Q15527 256 aaPredicted RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 OR8G1Q15617 311 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 SRSF7Q16629 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
VMP1-204ENST00000587259 SFRP4Q6FHJ7 346 aaPredicted RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 CRIP3Q6Q6R5 217 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 GLDNQ6ZMI3 551 aaPredicted RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 IDO2Q6ZQW0 420 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 HOGA1Q86XE5 327 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 OR51S1Q8NGJ8 323 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 OR4K15Q8NH41 348 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 SLC25A40Q8TBP6 338 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 NUDCD2Q8WVJ2 157 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 HPSE2Q8WWQ2 592 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 RDH5Q92781 318 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 CMBLQ96DG6 245 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 NKX3-1Q99801 234 aaPredicted RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 PECRQ9BY49 303 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 OR2J1Q9GZK6 312 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 OR51J1Q9H342 316 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 GHITMQ9H3K2 345 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 RIMS4Q9H426 269 aaPredicted RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 ZMAT3Q9HA38 289 aaKnown RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 C12orf4Q9NQ89 552 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 TMEM100Q9NV29 134 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 GLS2Q9UI32 602 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 ST3GAL6Q9Y274 331 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 SOX21Q9Y651 276 aaPredicted RBP6.55□□□□□ -1.36
VMP1-204ENST00000587259 TANC2Q9HCD6 1990 aa6.55□□□□□ -1.36
VMP1-204ENST00000587259 A0A0B4J293 547 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 A0A1W2PP11 408 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 TMEM82A0PJX8 343 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 VSTM5A8MXK1 200 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 ANGPTL7O43827 346 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 TIMM8AO60220 97 aaPredicted RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 PLATP00750 562 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 PTHLHP12272 177 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 FUT3P21217 361 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 CHATP28329 748 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 HRH1P35367 487 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 GLRXP35754 106 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 MDH2P40926 338 aaKnown RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 TMEM50BP56557 158 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 ARPC4P59998 168 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 UBA52P62987 128 aaKnown RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 LCN2P80188 198 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 CBX3Q13185 183 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 GRK1Q15835 563 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 PDLIM3Q53GG5 364 aaPredicted RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 SPRNQ5BIV9 151 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 FAM76BQ5HYJ3 339 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 TMEM255AQ5JRV8 349 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 PLAC9Q5JTB6 97 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 SPIN3Q5JUX0 258 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 ZNF626Q68DY1 528 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 OR2T2Q6IF00 324 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 RGS7BPQ6MZT1 257 aaPredicted RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 LPCAT3Q6P1A2 487 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 C1QL2Q7Z5L3 287 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 CALHM1Q8IU99 346 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 BHLHE23Q8NDY6 225 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 BEST4Q8NFU0 473 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 OR8G5Q8NG78 346 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 OR5AP2Q8NGF4 316 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 OR10K1Q8NGX5 313 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 OR13G1Q8NGZ3 307 aa6.54□□□□□ -1.36
VMP1-204ENST00000587259 KLF14Q8TD94 323 aaPredicted RBP6.54□□□□□ -1.36
VMP1-204ENST00000587259 EMG1Q92979 244 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms