RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RRP8O43159 456 aaKnown RBP10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 KRASP01116 189 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 CTXN2P0C2S0 81 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 PPT1P50897 306 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 INO80CQ6PI98 192 aaPredicted RBP10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 PPP1R35Q8TAP8 253 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 PIK3IP1Q96FE7 263 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 LINC00052Q96N35 136 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 GLRX2Q9NS18 164 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 DLL3Q9NYJ7 618 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 TRDCB7Z8K6 153 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 IFNA5P01569 189 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 PTAFRP25105 342 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 PSG7Q13046 419 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 SLC35G3Q8N808 338 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 HEXA-AS1Q9H8Q6 139 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 FN3KRPQ9HA64 309 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 DYNLRB1Q9NP97 96 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 MSTNO14793 375 aa10.65□□□□□ -0.71
SMARCA4-208ENST00000585799 OR8G2PQ6IF36 304 aa10.65□□□□□ -0.71
SMARCA4-208ENST00000585799 LIAT1Q6ZQX7 453 aa10.65□□□□□ -0.71
SMARCA4-208ENST00000585799 MARC2Q969Z3 335 aa10.65□□□□□ -0.71
SMARCA4-208ENST00000585799 CNTNAP3BQ96NU0 1288 aa10.65□□□□□ -0.71
SMARCA4-208ENST00000585799 CLCC1Q96S66 551 aa10.65□□□□□ -0.71
SMARCA4-208ENST00000585799 TAAR3PQ9P1P4 343 aa10.65□□□□□ -0.71
SMARCA4-208ENST00000585799 VSTM5A8MXK1 200 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 CLDN1O95832 211 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 OR2H2O95918 312 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 AKR1D1P51857 326 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 TMEM33P57088 247 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 ZNF154Q13106 437 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 TMEM182Q6ZP80 229 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 Q6ZT83 130 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 MYPOPQ86VE0 399 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 OR5P3Q8WZ94 311 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 HSF4Q9ULV5 492 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 ABCA1O95477 2261 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 CACNA1BQ00975 2339 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 HAND1O96004 215 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 CECR9P0C854 216 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 CEACAM1P13688 526 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 NDUFB7P17568 137 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 BTNL3Q6UXE8 466 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 STX12Q86Y82 276 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 TRAF4Q9BUZ4 470 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 CNTNAP3Q9BZ76 1288 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 OR1A1Q9P1Q5 309 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 FAM96BQ9Y3D0 163 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 WNK2Q9Y3S1 2297 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 SPG11Q96JI7 2443 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 TAGLNQ01995 201 aaKnown RBP10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 SURF2Q15527 256 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 MPV17LQ2QL34 196 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 Q6ZRG5 221 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 MOGAT3Q86VF5 341 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 NARFLQ9H6Q4 476 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 PLEKHF2Q9H8W4 249 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 RNF122Q9H9V4 155 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 ASCL3Q9NQ33 180 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 ZFP57Q9NU63 452 aa10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 PURGQ9UJV8 347 aaKnown RBP10.64□□□□□ -0.71
SMARCA4-208ENST00000585799 E5RGE8 158 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 SMPD2O60906 423 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 COX5BP10606 129 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 CD80P33681 288 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 PMELP40967 661 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 RPL23AP62750 156 aaKnown RBP10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 FAM27E3Q08E93 113 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 SPANXN5Q5MJ07 72 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 WNT2BQ93097 391 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 NMES1Q9C002 83 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 SLC25A32Q9H2D1 315 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 RIMS4Q9H426 269 aaPredicted RBP10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 NUP50Q9UKX7 468 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 NSG2Q9Y328 171 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 CEBPZOSA8MTT3 80 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 TNFSF4P23510 183 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 CASP6P55212 293 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 RPRMLQ8N4K4 120 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 PIEZO1Q92508 2521 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 CHD8Q9HCK8 2581 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 PQLC2LA1A4F0 135 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 SPINT2O43291 252 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 IFNA17P01571 189 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 SRPXP78539 464 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 SMIM21Q3B7S5 101 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 AKR1C8PQ5T2L2 129 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 PXDC1Q5TGL8 231 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 SPAG16Q8N0X2 631 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 H1FXQ92522 213 aaKnown RBP10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 GALMQ96C23 342 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 ABHD17AQ96GS6 310 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 NUDT16L1Q9BRJ7 211 aaKnown RBP10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 PSG11Q9UQ72 335 aa10.63□□□□□ -0.71
SMARCA4-208ENST00000585799 ANKRD11Q6UB99 2663 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 ATP6V1G2-DDX39BF2Z307 99 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 H0YIZ8 118 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 SUPT4H1P63272 117 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 GABRA6Q16445 453 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms