RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 IDI2-AS1Q9NZ38 188 aa8.37□□□□□ -1.07
RFFL-209ENST00000581265 ZMAT5Q9UDW3 170 aaKnown RBP8.37□□□□□ -1.07
RFFL-209ENST00000581265 SAC3D1A6NKF1 404 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 TMEM212A6NML5 194 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 SERPINE3A8MV23 424 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 ATP5HO75947 161 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 IGHV3-7P01780 117 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 TMEM11P17152 192 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 GZMHP20718 246 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 GLP1RP43220 463 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 SLC35B1P78383 322 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 MRPL28Q13084 256 aaKnown RBP8.36□□□□□ -1.07
RFFL-209ENST00000581265 HNF4GQ14541 408 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 IL13RA2Q14627 380 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 RSBN1Q5VWQ0 802 aaPredicted RBP8.36□□□□□ -1.07
RFFL-209ENST00000581265 ZNF529Q6P280 563 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 UNQ9370/PRO34162Q6UXP9 181 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 C18orf65Q6ZTR6 163 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 C8orf86Q6ZUL3 223 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 LHFPL3Q86UP9 236 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 RFESDQ8TAC1 157 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 LEAP2Q969E1 77 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 LGALS12Q96DT0 336 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 NR1H4Q96RI1 486 aaPredicted RBP8.36□□□□□ -1.07
RFFL-209ENST00000581265 ISG20L2Q9H9L3 353 aaKnown RBP8.36□□□□□ -1.07
RFFL-209ENST00000581265 U3KQK5 164 aa8.36□□□□□ -1.07
RFFL-209ENST00000581265 LINC01548A6NM66 108 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 NUDT19A8MXV4 375 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 E9PI62 339 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 H0YHG0 523 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 HSPB6O14558 160 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 IGKV1D-33P01593 117 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 IGKV1-33P01594 117 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 GAPDHP04406 335 aaKnown RBP8.35□□□□□ -1.07
RFFL-209ENST00000581265 GABRB1P18505 474 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 RAB3AP20336 220 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 GP2P55259 537 aaKnown RBP8.35□□□□□ -1.07
RFFL-209ENST00000581265 ZNF816Q0VGE8 651 aaPredicted RBP8.35□□□□□ -1.07
RFFL-209ENST00000581265 ZSCAN26Q16670 478 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 TEX38Q6PEX7 206 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 SLC35E3Q7Z769 313 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 TGIF2LXQ8IUE1 241 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 ZNF695Q8IW36 515 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 FOXRED2Q8IWF2 684 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 STPG2Q8N412 459 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 OR10X1Q8NGY0 326 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 OR5AK2Q8NH90 309 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 PLPPR1Q8TBJ4 325 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 MRGPRDQ8TDS7 321 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 CPNE2Q96FN4 548 aaPredicted RBP8.35□□□□□ -1.07
RFFL-209ENST00000581265 PDCD1LG2Q9BQ51 273 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 ALG8Q9BVK2 526 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 ERVK13-1Q9NX77 482 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 LINC00527Q9UJ94 153 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 DHDHQ9UQ10 334 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 ORC6Q9Y5N6 252 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 DNAH9Q9NYC9 4486 aa8.35□□□□□ -1.07
RFFL-209ENST00000581265 IGHV1-3A0A0C4DH29 117 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 CCL24O00175 119 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 AP4M1O00189 453 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 GABRPO00591 440 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 MAGEB3O15480 346 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 RAMP3O60896 148 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 FADS2O95864 444 aaKnown RBP8.34□□□□□ -1.07
RFFL-209ENST00000581265 CCDC159P0C7I6 412 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
RFFL-209ENST00000581265 SSTR5P35346 364 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 DGCR2P98153 550 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 RSU1Q15404 277 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 PNLIPRP3Q17RR3 467 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 PIGYQ3MUY2 71 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 Q8N6K4 173 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 C8orf31Q8N9H6 132 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 SUMF2Q8NBJ7 301 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 KLHL30-AS1Q8NEE0 82 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 OR51A2Q8NGJ7 313 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 OR52M1Q8NGK5 317 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 RHOXF1Q8NHV9 184 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 TNFAIP8L1Q8WVP5 186 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 RAX2Q96IS3 184 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 EAF1Q96JC9 268 aaPredicted RBP8.34□□□□□ -1.07
RFFL-209ENST00000581265 GPER1Q99527 375 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 DPCDQ9BVM2 203 aaPredicted RBP8.34□□□□□ -1.07
RFFL-209ENST00000581265 GON7Q9BXV9 100 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 ABCG5Q9H222 651 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 IFT22Q9H7X7 185 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 FAM53CQ9NYF3 392 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 AASSQ9UDR5 926 aa8.34□□□□□ -1.07
RFFL-209ENST00000581265 TRAV39A0A0B4J263 110 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 A0A1W2PPE3 182 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 CCRL2O00421 344 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 EI24O14681 340 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 HSD17B6O14756 317 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 MPZL2O60487 215 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 GPR12P47775 334 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 CDX1P47902 265 aaPredicted RBP8.33□□□□□ -1.08
RFFL-209ENST00000581265 GNG10P50151 68 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 ALDH3A2P51648 485 aa8.33□□□□□ -1.08
RFFL-209ENST00000581265 GBX2P52951 348 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms