RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 BNIP2Q12982 314 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 SLAMF1Q13291 335 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 BCL2A1Q16548 175 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 BSXQ3C1V8 233 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 SSX6Q7RTT6 188 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 LYZL2Q7Z4W2 148 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 FAM19A3Q7Z5A8 133 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 DPPA2Q7Z7J5 298 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 TCAIMQ8N3R3 496 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 OR6K3Q8NGY3 331 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 RORBQ92753 470 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 OLFM3Q96PB7 478 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 TBL2Q9Y4P3 447 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 SHANK3Q9BYB0 1731 aa1.71□□□□□ -2.14
SMCHD1-204ENST00000581226 ATAD5Q96QE3 1844 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 ATG2BQ96BY7 2078 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 ERICH4A6NGS2 130 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 CD300LBA8K4G0 201 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 TMEM250H0YL14 139 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 NPPAP01160 153 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 SCGB1C2P0DMR2 95 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 CCL23P55773 120 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 C1QTNF8P60827 252 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 TMED1Q13445 227 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 TRIP13Q15645 432 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 ELP2Q6IA86 826 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 FAM183BPQ6ZVS7 135 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 GATD1Q8NB37 220 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 SCGB1C1Q8TD33 95 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 NELFBQ8WX92 580 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 RAD51AP1Q96B01 352 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 PYURFQ96I23 114 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 PGLYRP3Q96LB9 341 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 CATSPER2Q96P56 530 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 B9D2Q9BPU9 175 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 SLC25A31Q9H0C2 315 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 OR52A5Q9H2C5 316 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 DIABLOQ9NR28 239 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 MRPL16Q9NX20 251 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 MS4A12Q9NXJ0 267 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 C14orf166Q9Y224 244 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 FADS3Q9Y5Q0 445 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 U3KQK5 164 aa1.7□□□□□ -2.14
SMCHD1-204ENST00000581226 COL5A3P25940 1745 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 MYO5BQ9ULV0 1848 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 IGKV1D-37A0A075B6S9 117 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 IGHV2-26A0A0B4J1V2 119 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 LINC00854A0A1B0GVQ3 168 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 A6NED7 52 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 FAM183AA6NL82 134 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 G3V3Q6 166 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 MKRN2OSH3BPM6 223 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 OVOL1O14753 267 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 NEMFO60524 1076 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 GABRA1P14867 456 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 CTLA4P16410 223 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 PRTN3P24158 256 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 HBG1P69891 147 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 HBG2P69892 147 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 CASP8Q14790 479 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 HES3Q5TGS1 186 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 LAMTOR1Q6IAA8 161 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 LAIR2Q6ISS4 152 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 HS3ST5Q8IZT8 346 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 SLC25A45Q8N413 288 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 OR8B2Q96RD0 313 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 PRSS27Q9BQR3 290 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 ANAPC13Q9BS18 74 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 ULBP1Q9BZM6 244 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 FBXL15Q9H469 300 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 SCML1Q9UN30 329 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 ZNF337Q9Y3M9 751 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 KIAA0232Q92628 1395 aa1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 NUP153P49790 1475 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-204ENST00000581226 ABCB11O95342 1321 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 PTPRKQ15262 1439 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 IGHV1-45A0A0A0MS14 117 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 A0A1B0GTI1 187 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 HSBP1L1C9JCN9 74 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 SLC2A1P11166 492 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 GZMHP20718 246 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 ZNF83P51522 516 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 RAB31Q13636 194 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 OR4D1Q15615 310 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 CST6Q15828 149 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 FAM162BQ5T6X4 162 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 MRPL52Q86TS9 123 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 MSRB3Q8IXL7 192 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 FAM45AQ8TCE6 357 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 PDCD6IPQ8WUM4 868 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 CCDC124Q96CT7 223 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 FAM210AQ96ND0 272 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 HBEGFQ99075 208 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 PITX2Q99697 317 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 OR2D2Q9H210 308 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 METTL8Q9H825 291 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 BTRCQ9Y297 605 aa1.68□□□□□ -2.14
SMCHD1-204ENST00000581226 KMT2EQ8IZD2 1858 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms