RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 ZNF485Q8NCK3 441 aa17■□□□□ 0.31
CSNK1D-216ENST00000581108 SETD9Q8NE22 299 aa17■□□□□ 0.31
CSNK1D-216ENST00000581108 OR52N1Q8NH53 320 aa17■□□□□ 0.31
CSNK1D-216ENST00000581108 CAPSLQ8WWF8 208 aa17■□□□□ 0.31
CSNK1D-216ENST00000581108 R3HDM4Q96D70 268 aa17■□□□□ 0.31
CSNK1D-216ENST00000581108 AKR1E2Q96JD6 320 aa17■□□□□ 0.31
CSNK1D-216ENST00000581108 RBM14Q96PK6 669 aaKnown RBP17■□□□□ 0.31
CSNK1D-216ENST00000581108 LINC00574Q9H8X3 128 aa17■□□□□ 0.31
CSNK1D-216ENST00000581108 CHCHD3Q9NX63 227 aaKnown RBP17■□□□□ 0.31
CSNK1D-216ENST00000581108 IL36GQ9NZH8 169 aa17■□□□□ 0.31
CSNK1D-216ENST00000581108 TRBV5-5A0A0J9YX44 114 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 SH2D7A6NKC9 451 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 NPIPB11E5RHQ5 1161 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 OR2F2O95006 317 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 IL1AP01583 271 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 CSTBP04080 98 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 AMY1AP04745 511 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 AMY2AP04746 511 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 IGFBP3P17936 291 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 SERPINA2P20848 420 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 MNDAP41218 407 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 KCNJ3P48549 501 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 RBM11P57052 281 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 RPS11P62280 158 aaKnown RBP eCLIP16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 PAX5Q02548 391 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 ST3GAL4Q11206 333 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 RIPK1Q13546 671 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 RCN1Q15293 331 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 BEAN1Q3B7T3 259 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 ABCA11PQ4W5N1 156 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 SAMD5Q5TGI4 173 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 OR5AU1Q8NGC0 362 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 S100A13Q99584 98 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 ZNF184Q99676 751 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 C8orf4Q9NR00 106 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 PSG11Q9UQ72 335 aa16.99■□□□□ 0.31
CSNK1D-216ENST00000581108 MAGEA13PA6NCF6 341 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 OOSP1A8MZH6 123 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 GEMIN2O14893 280 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 OR7C1O76099 320 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 LPLP06858 475 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 SSTR5P35346 364 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 MED21Q13503 144 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 Q499Y3 187 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 NHLRC3Q5JS37 347 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 CCDC144NLQ6NUI1 221 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 CENPVQ7Z7K6 275 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 IFT22Q9H7X7 185 aa16.98■□□□□ 0.31
CSNK1D-216ENST00000581108 TRAV8-7A0A075B6U6 113 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 A0A1W2PP11 408 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 A0A1W2PPK0 400 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 GPX5O75715 221 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 GNAO1P09471 354 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 GNG10P50151 68 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 CD83Q01151 205 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 DIAPH2-AS1Q14236 149 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 YIF1BQ5BJH7 314 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 LAIR2Q6ISS4 152 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 OR4F17Q8NGA8 305 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 TOMM40LQ969M1 308 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 RPEQ96AT9 228 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 PGLYRP3Q96LB9 341 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 OR4F4Q96R69 305 aa16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 PAK1IP1Q9NWT1 392 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 AMMECR1Q9Y4X0 333 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-216ENST00000581108 PNMA8CA0A1B0GUJ8 204 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 A0A1W2PRX2 142 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 XPNPEP2O43895 674 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 SLC22A6Q4U2R8 563 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 ATAD3CQ5T2N8 411 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 KPRPQ5T749 579 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 OR10A7Q8NGE5 316 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 OR14A2Q96R54 314 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 CKLFQ9UBR5 152 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 HSPE1-MOB4S4R3N1 261 aa16.96■□□□□ 0.31
CSNK1D-216ENST00000581108 A0A1W2PPE3 182 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A18PA6NE21 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A16PA6NEW6 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 EFCAB10A6NFE3 127 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A20PA6NIJ5 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A9PA6NNJ1 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A12PA8MX19 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A5PA8MXJ8 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 PRB2P02812 416 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A15PP0C7V4 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A13PP0C7W8 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A14PP0C7W9 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM90A24PP0C7X0 464 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 FAM106CPP0CH98 169 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 GZMHP20718 246 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 OXLD1Q5BKU9 147 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 TCTEX1D4Q5JR98 221 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 C8orf59Q8N0T1 100 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 DRAM1Q8N682 238 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 OR56B4Q8NH76 319 aa16.95■□□□□ 0.3
CSNK1D-216ENST00000581108 TRBV5-7A0A0A0MS05 114 aa16.94■□□□□ 0.3
CSNK1D-216ENST00000581108 A0A1W2PPI3 338 aa16.94■□□□□ 0.3
CSNK1D-216ENST00000581108 TMEM30CPA0ZSE6 113 aa16.94■□□□□ 0.3
CSNK1D-216ENST00000581108 ZNF780AO75290 641 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-216ENST00000581108 SNRNP70P08621 437 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms