RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 OR52W1Q6IF63 320 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 CD200R1LQ6Q8B3 271 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 SPARTQ8N0X7 666 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 OR6M1Q8NGM8 313 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 FCGR1BQ92637 280 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 Q96M66 194 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 GFI1Q99684 422 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 CLEC7AQ9BXN2 247 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 CST11Q9H112 138 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 LINC00574Q9H8X3 128 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 TNFRSF19Q9NS68 423 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 ING3Q9NXR8 418 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 VPREB3Q9UKI3 123 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 LRRC42Q9Y546 428 aa11.73□□□□□ -0.53
MKS1-207ENST00000578789 MEIKINA0A087WXM9 373 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 A0A087X0M5 115 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 KBTBD11-OT1A0A1B0GTJ5 212 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 A0A1B0GX30 115 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 BTBD17A6NE02 478 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 SLC22A1O15245 554 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 GPR137BO60478 399 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 CRTAPO75718 401 aaPredicted RBP11.72□□□□□ -0.53
MKS1-207ENST00000578789 CDK2P24941 298 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 GDNFP39905 211 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 LRRC75BQ2VPJ9 315 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 LDLRAD2Q5SZI1 272 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 ATAD3CQ5T2N8 411 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 ZNF773Q6PK81 442 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 LHFPL4Q7Z7J7 247 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 RTN4RL2Q86UN3 420 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 BANF2Q9H503 90 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 CALYQ9NYX4 217 aa11.72□□□□□ -0.53
MKS1-207ENST00000578789 TMEM30CPA0ZSE6 113 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 VGLL3A8MV65 326 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 NDUFA7O95182 113 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 IL1AP01583 271 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 VSIG8P0DPA2 414 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 GALP22466 123 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 HTR2CP28335 458 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 KCTD21Q4G0X4 260 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 MINOS1Q5TGZ0 78 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 BAIAP2L2Q6UXY1 529 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 GDPGP1Q6ZNW5 385 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 DYNAPQ8N1N2 210 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 ZNF565Q8N9K5 539 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 OR4P4Q8NGL7 312 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 KIRREL1Q96J84 757 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 SELENOIQ9C0D9 397 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 C1RLQ9NZP8 487 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 MINOS1-NBL1R4GNA1 71 aa11.71□□□□□ -0.53
MKS1-207ENST00000578789 TRDV1A0A1B0GX56 115 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 TMEM14DPA8MWL7 114 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 NPIPB11E5RHQ5 1161 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 H3BUI4 141 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 H3BUX3 64 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 CCRL2O00421 344 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 SLC17A2O00624 439 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 BPNT1O95861 308 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 MPIG6BO95866 241 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 IGLV1-47P01700 117 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 GLAP06280 429 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 OMGP23515 440 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 CALRP27797 417 aaKnown RBP11.7□□□□□ -0.54
MKS1-207ENST00000578789 QRFPP83859 136 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 RELBQ01201 579 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 DYNC1I2Q13409 638 aaKnown RBP11.7□□□□□ -0.54
MKS1-207ENST00000578789 UNC119Q13432 240 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 RBM39Q14498 530 aaKnown RBP11.7□□□□□ -0.54
MKS1-207ENST00000578789 SIGIRRQ6IA17 410 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 RAB12Q6IQ22 244 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 ZNF497Q6ZNH5 498 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 GAPTQ8N292 157 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 ABHD12Q8N2K0 398 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 OR10A7Q8NGE5 316 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 MRGPRDQ8TDS7 321 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 TAF15Q92804 592 aaKnown RBP eCLIP11.7□□□□□ -0.54
MKS1-207ENST00000578789 FAM46BQ96A09 425 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 MALSU1Q96EH3 234 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 SSX3Q99909 188 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 TM2D1Q9BX74 207 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 ZNF286AQ9HBT8 521 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 IDI2-AS1Q9NZ38 188 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 TENM1Q9UKZ4 2725 aa11.7□□□□□ -0.54
MKS1-207ENST00000578789 MCRIP1C9JLW8 97 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 PDCD6O75340 191 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 CRYBA1P05813 215 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 FUT3P21217 361 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 CFPP27918 469 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 PSMB9P28065 219 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 DYNLT3P51808 116 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 RAG2P55895 527 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 RPS27AP62979 156 aaKnown RBP11.69□□□□□ -0.54
MKS1-207ENST00000578789 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 OR2W3Q7Z3T1 314 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 OR4F5Q8NH21 305 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 KCNG3Q8TAE7 436 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 ZNF596Q8TC21 504 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 PIFOQ8TCI5 191 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms