RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 TRBV5-5A0A0J9YX44 114 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 CALCBP10092 127 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 IGFBP3P17936 291 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 FSTP19883 344 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 RBM11P57052 281 aaKnown RBP11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 PPP3R1P63098 170 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 SCN1BQ07699 218 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 ATXN7L3Q14CW9 347 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 YIF1BQ5BJH7 314 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 ARSJQ5FYB0 599 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 DMKNQ6E0U4 476 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 CENPVQ7Z7K6 275 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 C1QL4Q86Z23 238 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 OSR2Q8N2R0 312 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 LINC00311Q8N616 119 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 ZNF485Q8NCK3 441 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 SETD9Q8NE22 299 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 OR4X2Q8NGF9 303 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 RPEQ96AT9 228 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 GPER1Q99527 375 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 METTL9Q9H1A3 318 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 PPIL3Q9H2H8 161 aaKnown RBP11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 RAB9BQ9NP90 201 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 IDI2-AS1Q9NZ38 188 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 KIF25Q9UIL4 384 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
SMARCE1-213ENST00000578044 CCRL2O00421 344 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 ORC5O43913 435 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 CA11O75493 328 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 GLAP06280 429 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 JUNBP17275 347 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 MYL12AP19105 171 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 BDKRB2P30411 391 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 ZNF93P35789 620 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 GTF2A1P52655 376 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 TAS2R43P59537 309 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 ZNF816Q0VGE8 651 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 NSUN5P1Q3KNT7 163 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 STEAP3Q658P3 488 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 BAIAP2L2Q6UXY1 529 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 GAPTQ8N292 157 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 COMMD1Q8N668 190 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 OR51A2Q8NGJ7 313 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 OR13A1Q8NGR1 328 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 TOMM40LQ969M1 308 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 DPCDQ9BVM2 203 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 PSG11Q9UQ72 335 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 ST3GAL6Q9Y274 331 aa11.54□□□□□ -0.56
SMARCE1-213ENST00000578044 A0A1W2PPI3 338 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 FAM90A10PA6NDY2 464 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 FAM90A7PA6NKC0 464 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 FAM90A23PA8MXZ1 464 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 CSTBP04080 98 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 GLP1RP43220 463 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 ETV1P50549 477 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 Q499Y3 187 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 ABCA11PQ4W5N1 156 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 TCTEX1D4Q5JR98 221 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 ZNF554Q86TJ5 538 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 SUMF2Q8NBJ7 301 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 CHPT1Q8WUD6 406 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 S100A13Q99584 98 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 GPR61Q9BZJ8 451 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 CHCHD3Q9NX63 227 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 CNOT2Q9NZN8 540 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 RCC2Q9P258 522 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 CKLFQ9UBR5 152 aa11.53□□□□□ -0.56
SMARCE1-213ENST00000578044 TMEM30CPA0ZSE6 113 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 LPLP06858 475 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 GTF2F2P13984 249 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 NFYBP25208 207 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 OR3A4PP47883 348 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 ZNF137PP52743 207 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 RIPK1Q13546 671 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 PIGYQ3MUY2 71 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 DDI2Q5TDH0 399 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 XAF1Q6GPH4 301 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 Q6ZPA2 131 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 IZUMO1Q8IYV9 350 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 OR8H1Q8NGG4 311 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 PLPPR1Q8TBJ4 325 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 GHSRQ92847 366 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 TMEM80Q96HE8 168 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 ZFP57Q9NU63 452 aa11.52□□□□□ -0.57
SMARCE1-213ENST00000578044 TRBV5-7A0A0A0MS05 114 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 TCRBV4S1A1TA0A5B7 111 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 EFCAB10A6NFE3 127 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 C15orf65H3BRN8 121 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 TXNL1O43396 289 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 OR7C1O76099 320 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 HTR3BO95264 441 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 CLIC3O95833 236 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 IGHG2P01859 326 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 SOX2P48431 317 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 LOXL3P58215 753 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 RPS11P62280 158 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 SLC35A2P78381 396 aa11.51□□□□□ -0.57
SMARCE1-213ENST00000578044 ADARB1P78563 741 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms