RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ATAD3CQ5T2N8 411 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 OR52W1Q6IF63 320 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 OR13A1Q8NGR1 328 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 GCDHQ92947 438 aaPredicted RBP15.69■□□□□ 0.1
SS18-208ENST00000577751 CST11Q9H112 138 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 LINC00574Q9H8X3 128 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 AK6Q9Y3D8 172 aaKnown RBP15.69■□□□□ 0.1
SS18-208ENST00000577751 TBL2Q9Y4P3 447 aaKnown RBP15.69■□□□□ 0.1
SS18-208ENST00000577751 IGHV2-26A0A0B4J1V2 119 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 KBTBD11-OT1A0A1B0GTJ5 212 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 SLC17A2O00624 439 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 ARG1P05089 322 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 GDNFP39905 211 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 LGALS4P56470 323 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 QRFPP83859 136 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 LDLRAD2Q5SZI1 272 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 SIGIRRQ6IA17 410 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 BRICD5Q6PL45 260 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 BAIAP2L2Q6UXY1 529 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 LHFPL4Q7Z7J7 247 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 OR6M1Q8NGM8 313 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 TNFRSF19Q9NS68 423 aa15.68■□□□□ 0.1
SS18-208ENST00000577751 A0A087X0M5 115 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 TRAV1-2A0A0B4J238 106 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 A0A1B0GX30 115 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 FAM181BA6NEQ2 426 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 NPIPB11E5RHQ5 1161 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 GLAP06280 429 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 OMGP23515 440 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 PSMB9P28065 219 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 CD34P28906 385 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 AANATQ16613 207 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 PRAMEF5Q5TYX0 476 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 DYRK2Q92630 601 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 FAM46BQ96A09 425 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 MALSU1Q96EH3 234 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 CLEC7AQ9BXN2 247 aa15.67■□□□□ 0.1
SS18-208ENST00000577751 SHISA3A0PJX4 238 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 TMEM30CPA0ZSE6 113 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 TMEM14DPA8MWL7 114 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 MCRIP1C9JLW8 97 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 BPNT1O95861 308 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 MPIG6BO95866 241 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 FUT3P21217 361 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 GLP1RP43220 463 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 PSMD7P51665 324 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 RPL15P61313 204 aaKnown RBP15.66■□□□□ 0.1
SS18-208ENST00000577751 RPS27AP62979 156 aaKnown RBP15.66■□□□□ 0.1
SS18-208ENST00000577751 UNC119Q13432 240 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 RBM39Q14498 530 aaKnown RBP15.66■□□□□ 0.1
SS18-208ENST00000577751 SYT6Q5T7P8 510 aaPredicted RBP15.66■□□□□ 0.1
SS18-208ENST00000577751 OR10K2Q6IF99 312 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 RAB12Q6IQ22 244 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 ZNF497Q6ZNH5 498 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 RTN4RL2Q86UN3 420 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 GAPTQ8N292 157 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 ABHD12Q8N2K0 398 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 KCNG3Q8TAE7 436 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 SSX3Q99909 188 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 TM2D1Q9BX74 207 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 CALYQ9NYX4 217 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 PEX16Q9Y5Y5 336 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 V9GY05 133 aa15.66■□□□□ 0.1
SS18-208ENST00000577751 H3BUI4 141 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 MT-ND4P03905 459 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 GZMHP20718 246 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 PAX6P26367 422 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 FOXL1Q12952 345 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 DYNC1I2Q13409 638 aaKnown RBP15.65■□□□□ 0.1
SS18-208ENST00000577751 MINOS1Q5TGZ0 78 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 DYNAPQ8N1N2 210 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 OR5R1Q8NH85 324 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 MRGPRDQ8TDS7 321 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 KIRREL1Q96J84 757 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 TMEM59Q9BXS4 323 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 PLGRKTQ9HBL7 147 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 VPREB3Q9UKI3 123 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 MINOS1-NBL1R4GNA1 71 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 STAB1Q9NY15 2570 aa15.65■□□□□ 0.1
SS18-208ENST00000577751 TRAV39A0A0B4J263 110 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 VGLL3A8MV65 326 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 GPR137BO60478 399 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 PDCD6O75340 191 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 IL1AP01583 271 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 IGLV1-47P01700 117 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 ARSBP15848 533 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 FGF9P31371 208 aaPredicted RBP15.64■□□□□ 0.09
SS18-208ENST00000577751 AWAT1Q58HT5 328 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 UTF1Q5T230 341 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 C12orf54Q6X4T0 127 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 OR2W3Q7Z3T1 314 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 OR10A7Q8NGE5 316 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 OR4P4Q8NGL7 312 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 PIFOQ8TCI5 191 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 NEK7Q8TDX7 302 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 TAF15Q92804 592 aaKnown RBP eCLIP15.64■□□□□ 0.09
SS18-208ENST00000577751 KCNK15Q9H427 330 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 ZNF286AQ9HBT8 521 aa15.64■□□□□ 0.09
SS18-208ENST00000577751 BTBD17A6NE02 478 aa15.63■□□□□ 0.09
SS18-208ENST00000577751 H3BUX3 64 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms