RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RFT1Q96AA3 541 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 EME1Q96AY2 570 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 R3HDM4Q96D70 268 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 MALSU1Q96EH3 234 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ADAT3Q96EY9 351 aaPredicted RBP4.98□□□□□ -1.61
NUP88-212ENST00000576708 SNX22Q96L94 193 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ZNF714Q96N38 554 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 CIB1Q99828 191 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 RIBC2Q9H4K1 309 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 PLEKHA1Q9HB21 404 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 RAB18Q9NP72 206 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ABCB10Q9NRK6 738 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 WARS2Q9UGM6 360 aaKnown RBP4.98□□□□□ -1.61
NUP88-212ENST00000576708 SLC7A11Q9UPY5 501 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 PRELID1Q9Y255 219 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 IGHV2-26A0A0B4J1V2 119 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 IGKV1-12A0A0C4DH73 117 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 SAC3D1A6NKF1 404 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 DHRS7CA6NNS2 312 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 EBAG9O00559 213 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 MAGEB3O15480 346 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 ENTPD6O75354 484 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 IGKV1D-12P01611 117 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 OR2T7P0C7T2 308 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 IGLL1P15814 213 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 HOXB6P17509 224 aaKnown RBP4.97□□□□□ -1.61
NUP88-212ENST00000576708 PRKACAP17612 351 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 ATF1P18846 271 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 HTR1FP30939 366 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 VDAC2P45880 294 aaPredicted RBP4.97□□□□□ -1.61
NUP88-212ENST00000576708 OR3A1P47881 315 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 OR12D2P58182 307 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 NANOS3P60323 173 aaKnown RBP4.97□□□□□ -1.61
NUP88-212ENST00000576708 BLOC1S1P78537 153 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 ZNF91Q05481 1191 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 SCN1BQ07699 218 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 PRAMEF5Q5TYX0 476 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 C10orf99Q6UWK7 81 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 GID4Q8IVV7 300 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 ZNF676Q8N7Q3 588 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 OR10AC1Q8NH08 325 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 NDNFQ8TB73 568 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 MRAPQ8TCY5 172 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 RPS4Y2Q8TD47 263 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 BCAS4Q8TDM0 211 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 FGGYQ96C11 551 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 BORCS8Q96FH0 119 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 SPACA5Q96QH8 159 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 PRRG3Q9BZD7 231 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 PRSS22Q9GZN4 317 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 CHST5Q9GZS9 411 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 GABARAPL1Q9H0R8 117 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 TMEM133Q9H2Q1 129 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 GNG8Q9UK08 70 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.97□□□□□ -1.61
NUP88-212ENST00000576708 GSTK1Q9Y2Q3 226 aa4.97□□□□□ -1.61
NUP88-212ENST00000576708 TBL2Q9Y4P3 447 aaKnown RBP4.97□□□□□ -1.61
NUP88-212ENST00000576708 PLXNB1O43157 2135 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 hADV38S2A0JD32 116 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 FAM90A22PA8MWA6 464 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 PIN1P1O15428 100 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 GATBO75879 557 aaKnown RBP4.96□□□□□ -1.62
NUP88-212ENST00000576708 SULT1C4O75897 302 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 RBP4P02753 201 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 AZGP1P25311 298 aaKnown RBP4.96□□□□□ -1.62
NUP88-212ENST00000576708 FASP25445 335 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 PPIFP30405 207 aaKnown RBP4.96□□□□□ -1.62
NUP88-212ENST00000576708 GLIPR1P48060 266 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 DYNLT3P51808 116 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 PPP5CP53041 499 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 ATP1B3P54709 279 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 MTCP1P56278 107 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 P2RX3P56373 397 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 ISL1P61371 349 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 EMX1Q04741 257 aaPredicted RBP4.96□□□□□ -1.62
NUP88-212ENST00000576708 MEF2CQ06413 473 aaPredicted RBP4.96□□□□□ -1.62
NUP88-212ENST00000576708 AESQ08117 197 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 TCTEX1D4Q5JR98 221 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 CCDC121Q6ZUS5 278 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 TRAPPC6BQ86SZ2 158 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 NDUFA11Q86Y39 141 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 FAM58AQ8N1B3 248 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 OR5AU1Q8NGC0 362 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 OR51A4Q8NGJ6 313 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 OR5D18Q8NGL1 313 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 OR4P4Q8NGL7 312 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 OR2G2Q8NGZ5 317 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 PHF21AQ96BD5 680 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 CMTM3Q96MX0 182 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 TXN2Q99757 166 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 CLEC7AQ9BXN2 247 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 ZNF286AQ9HBT8 521 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 HMG20AQ9NP66 347 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 PITPNC1Q9UKF7 332 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 AP4S1Q9Y587 144 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 LINC00312Q9Y6C7 94 aa4.96□□□□□ -1.62
NUP88-212ENST00000576708 TRAV6A0A075B6T7 132 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 TRBV2A0A0J9YWF9 115 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 LOC102723971A0A1B0GUV8 181 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 MGST3O14880 152 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms