RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 C11orf42Q8N5U0 333 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 OR56B1Q8NGI3 324 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 PLPPR1Q8TBJ4 325 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 TNFRSF14Q92956 283 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZDHHC16Q969W1 377 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 CENPOQ9BU64 300 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 LIN7BQ9HAP6 207 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 PLEKHJ1Q9NW61 149 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 SESN1Q9Y6P5 492 aa10.45□□□□□ -0.74
TRAPPC1-206ENST00000573989 KBTBD11-OT1A0A1B0GTJ5 212 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 MEX3AA1L020 520 aaKnown RBP10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 MEIOCA2RUB1 952 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 NPFFO15130 113 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 PAHP00439 452 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 FBP1P09467 338 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 SMIM18P0DKX4 95 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 RAB6AP20340 208 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 BLVRBP30043 206 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 HILS1P60008 231 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 MXD1Q05195 221 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 KLRD1Q13241 179 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 MIDNQ504T8 468 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 C6orf183Q5T699 404 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 RUSC1-AS1Q66K80 236 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 SFXN4Q6P4A7 337 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 TRAT1Q6PIZ9 186 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 BRICD5Q6PL45 260 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZNF782Q6ZMW2 699 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZNF497Q6ZNH5 498 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 TCF23Q7RTU1 214 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 BCL6BQ8N143 479 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 PNKDQ8N490 385 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 OR13F1Q8NGS4 319 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 PTX4Q96A99 478 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 LPAR5Q9H1C0 372 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 KCNK15Q9H427 330 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZMAT3Q9HA38 289 aaKnown RBP10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 DAPK2Q9UIK4 370 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 TRAPPC2LQ9UL33 140 aa10.44□□□□□ -0.74
TRAPPC1-206ENST00000573989 TMEM272A0A1B0GTI8 110 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 UBE2QL1A1L167 161 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 TRIM77I1YAP6 450 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 COX7A1P24310 79 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 CDK2P24941 298 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 CHATP28329 748 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 VEGFCP49767 419 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 SCAND1P57086 179 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 BAMBIQ13145 260 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 KRTAP21-3Q3LHN1 58 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 SIGIRRQ6IA17 410 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 Q6ZTK2 550 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 GPR141Q7Z602 305 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 RTN4RL2Q86UN3 420 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 FAM89BQ8N5H3 189 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 SIGLECL1Q8N7X8 197 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 OR10A7Q8NGE5 316 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 OR13A1Q8NGR1 328 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 MRGPRDQ8TDS7 321 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 NICN1Q9BSH3 213 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 FUNDC2Q9BWH2 189 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 TMEM133Q9H2Q1 129 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 RNF167Q9H6Y7 350 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 CALYQ9NYX4 217 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 KCNIP1Q9NZI2 227 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZNF581Q9P0T4 197 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 HSF4Q9ULV5 492 aa10.43□□□□□ -0.74
TRAPPC1-206ENST00000573989 A0A1W2PRD5 423 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 A0A1W2PRF3 423 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 A0A1W2PRM7 423 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 SMIM30A4D0T7 59 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 LDLRAD4O15165 306 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 SPINT2O43291 252 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 ORC5O43913 435 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 SCGNO76038 276 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 IL1AP01583 271 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 MT-ND4P03905 459 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 ARG1P05089 322 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 SAA4P35542 130 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 DLX1P56177 255 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 LSM3P62310 102 aaKnown RBP10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 MRPS15P82914 257 aaKnown RBP10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 PRB3Q04118 309 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 DYNC1I2Q13409 638 aaKnown RBP10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 ARL6IP1Q15041 203 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 DEFB112Q30KQ8 113 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 C6orf201Q7Z4U5 140 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 OR11H6Q8NGC7 330 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 CCDC107Q8WV48 283 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 TMEM158Q8WZ71 300 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 CLEC7AQ9BXN2 247 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 RIMS4Q9H426 269 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 IDI2-AS1Q9NZ38 188 aa10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 TBL2Q9Y4P3 447 aaKnown RBP10.42□□□□□ -0.74
TRAPPC1-206ENST00000573989 IGHV2-26A0A0B4J1V2 119 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 A0A0U1RQK1 487 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 BTBD17A6NE02 478 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 TOR1AO14656 332 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 CGB3P0DN86 165 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 CGB7P0DN87 165 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 SLC2A2P11168 524 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms