RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 OR10A7Q8NGE5 316 aa11.38□□□□□ -0.59
RPAIN-211ENST00000572174 COQ2Q96H96 371 aa11.38□□□□□ -0.59
RPAIN-211ENST00000572174 Q96M66 194 aa11.38□□□□□ -0.59
RPAIN-211ENST00000572174 URM1Q9BTM9 101 aaKnown RBP11.38□□□□□ -0.59
RPAIN-211ENST00000572174 SELENOIQ9C0D9 397 aa11.38□□□□□ -0.59
RPAIN-211ENST00000572174 TMEM133Q9H2Q1 129 aa11.38□□□□□ -0.59
RPAIN-211ENST00000572174 RAB18Q9NP72 206 aa11.38□□□□□ -0.59
RPAIN-211ENST00000572174 RCC2Q9P258 522 aaKnown RBP11.38□□□□□ -0.59
RPAIN-211ENST00000572174 MINOS1-NBL1R4GNA1 71 aa11.38□□□□□ -0.59
RPAIN-211ENST00000572174 V9GY05 133 aa11.38□□□□□ -0.59
RPAIN-211ENST00000572174 IGHV2-26A0A0B4J1V2 119 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 KBTBD11-OT1A0A1B0GTJ5 212 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 A0A1B0GUS0 222 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 MDFIC2A0A1B0GVS7 189 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 CD37P11049 281 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 ARSBP15848 533 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 GZMHP20718 246 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 FUT3P21217 361 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 CEACAM3P40198 252 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 IER3P46695 156 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 DYNC1I2Q13409 638 aaKnown RBP11.37□□□□□ -0.59
RPAIN-211ENST00000572174 RAB11BQ15907 218 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 SSX1Q16384 188 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 LRRC75BQ2VPJ9 315 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 C6orf183Q5T699 404 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 RSBN1Q5VWQ0 802 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-211ENST00000572174 HCP5Q6MZN7 132 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 C12orf54Q6X4T0 127 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 LIAT1Q6ZQX7 453 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 MALSU1Q96EH3 234 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 C1orf147Q96MC9 270 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-211ENST00000572174 NEDD4LQ96PU5 975 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 NKX3-1Q99801 234 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-211ENST00000572174 KIF25Q9UIL4 384 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 VPREB3Q9UKI3 123 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 STUB1Q9UNE7 303 aa11.37□□□□□ -0.59
RPAIN-211ENST00000572174 AMMECR1Q9Y4X0 333 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-211ENST00000572174 A0A1W2PRD5 423 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 A0A1W2PRF3 423 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 A0A1W2PRM7 423 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 TMEM89A2RUT3 159 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 ODF3BA8MYP8 253 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 AIPO00170 330 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 PDCD6O75340 191 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 MPIG6BO95866 241 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 IL1AP01583 271 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 HKR1P10072 659 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 CDK2P24941 298 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 CD34P28906 385 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 FGF9P31371 208 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-211ENST00000572174 COMPP49747 757 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-211ENST00000572174 PRRX1P54821 245 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
RPAIN-211ENST00000572174 TIMM50Q3ZCQ8 353 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 RAB12Q6IQ22 244 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 SLC16A12Q6ZSM3 486 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 ZNF554Q86TJ5 538 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 DUX5Q96PT3 197 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 MEGF9Q9H1U4 602 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 PPIL3Q9H2H8 161 aaKnown RBP11.36□□□□□ -0.59
RPAIN-211ENST00000572174 BANF2Q9H503 90 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 ABCB10Q9NRK6 738 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 ING3Q9NXR8 418 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 CALYQ9NYX4 217 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 SSR3Q9UNL2 185 aa11.36□□□□□ -0.59
RPAIN-211ENST00000572174 FBN1P35555 2871 aaKnown RBP11.36□□□□□ -0.59
RPAIN-211ENST00000572174 A0A087WXM4 84 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 A0A087X0M5 115 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 A0A1B0GX30 115 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 A0A1W2PP11 408 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 TOR1AO14656 332 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 GP2P55259 537 aaKnown RBP11.35□□□□□ -0.59
RPAIN-211ENST00000572174 RPS27AP62979 156 aaKnown RBP11.35□□□□□ -0.59
RPAIN-211ENST00000572174 PRAMEF5Q5TYX0 476 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 ZNF497Q6ZNH5 498 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 TPRA1Q86W33 373 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 ABHD12Q8N2K0 398 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 NDNFQ8TB73 568 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 FAM46BQ96A09 425 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 TM2D1Q9BX74 207 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 LINC00574Q9H8X3 128 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 ETAA1Q9NY74 926 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 PITPNC1Q9UKF7 332 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 PEX16Q9Y5Y5 336 aa11.35□□□□□ -0.59
RPAIN-211ENST00000572174 VGLL3A8MV65 326 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 SPINT2O43291 252 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 ORC5O43913 435 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 VSIG8P0DPA2 414 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 RAB3BP20337 219 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 CFPP27918 469 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 HTR1DP28221 377 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 DLX1P56177 255 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 Q3ZCU0 254 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 SYT6Q5T7P8 510 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-211ENST00000572174 DHRS7BQ6IAN0 325 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-211ENST00000572174 CCDC144NLQ6NUI1 221 aa11.34□□□□□ -0.59
RPAIN-211ENST00000572174 TMEM104Q8NE00 496 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms