RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ISYNA1Q9NPH2 558 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 BATF3Q9NR55 127 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 SIGLEC9Q9Y336 463 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 TBL2Q9Y4P3 447 aaKnown RBP8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 PKD1L1Q8TDX9 2849 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 KBTBD11-OT1A0A1B0GTJ5 212 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 CLPSL1A2RUU4 121 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 ZNF729A6NN14 1252 aaPredicted RBP8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 POM121CA8CG34 1229 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 NPIPB11E5RHQ5 1161 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 TSPAN9O75954 239 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 IGLV1-47P01700 117 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 UCHL1P09936 223 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 CD37P11049 281 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 GTF2F2P13984 249 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 NFYBP25208 207 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 MAPK3P27361 379 aaPredicted RBP8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 CD34P28906 385 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 SSTR5P35346 364 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 GLP1RP43220 463 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 RPL15P61313 204 aaKnown RBP8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 FABP5Q01469 135 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 MLLT11Q13015 90 aaPredicted RBP8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 SSX1Q16384 188 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 LTC4SQ16873 150 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 MPV17LQ2QL34 196 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 C1orf100Q5SVJ3 147 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 HIST2H2BDQ6DRA6 164 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 DHRS7BQ6IAN0 325 aaPredicted RBP8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 RTN4RL2Q86UN3 420 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 OR5R1Q8NH85 324 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 UBALD1Q8TB05 177 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 CCDC107Q8WV48 283 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 FAM46BQ96A09 425 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 KIRREL1Q96J84 757 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 BARHL1Q9BZE3 327 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 SELENOIQ9C0D9 397 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 GAL3ST2Q9H3Q3 398 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 NCOR1P1Q9H4R4 102 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 BEX1Q9HBH7 125 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 TCF7L1Q9HCS4 588 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 ACOT13Q9NPJ3 140 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 CALYQ9NYX4 217 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 IDI2-AS1Q9NZ38 188 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 OR6C3Q9NZP0 311 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 RNF114Q9Y508 228 aa8.25□□□□□ -1.09
GTF3C1-213ENST00000571886 A0A087X0M5 115 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 A0A1B0GX30 115 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 SHISA3A0PJX4 238 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 A6NDX4 124 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 BTBD17A6NE02 478 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 VGLL3A8MV65 326 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 LY6LH3BQJ8 138 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 C15orf65H3BRN8 121 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 DENRO43583 198 aaKnown RBP8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 ZNF780AO75290 641 aaPredicted RBP8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 CRTAPO75718 401 aaPredicted RBP8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 MT-ND4P03905 459 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 VSIG8P0DPA2 414 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 MGMTP16455 207 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 CD24P25063 80 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 PROK1P58294 105 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 PAX5Q02548 391 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 EMX1Q04741 257 aaPredicted RBP8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 GPR176Q14439 515 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 AANATQ16613 207 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 HSD17B12Q53GQ0 312 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 MINOS1Q5TGZ0 78 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 SHISA2Q6UWI4 295 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 Q6ZS46 218 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 LINC00596Q86U02 117 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 TMEM219Q86XT9 240 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 NKAIN3Q8N8D7 197 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 NDNFQ8TB73 568 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 WFDC12Q8WWY7 111 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 Q96M66 194 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 UQCC2Q9BRT2 126 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 C16orf95Q9H693 158 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 LINC00574Q9H8X3 128 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 RCC2Q9P258 522 aaKnown RBP8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 AK6Q9Y3D8 172 aaKnown RBP8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 MINOS1-NBL1R4GNA1 71 aa8.24□□□□□ -1.09
GTF3C1-213ENST00000571886 A0A1W2PPE3 182 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 UBE2QL1A1L167 161 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 MPIG6BO95866 241 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 IL1AP01583 271 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 HTR1DP28221 377 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 KCNJ3P48549 501 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 QRFPP83859 136 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 UNC119Q13432 240 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 DIAPH2-AS1Q14236 149 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 TBCEQ15813 527 aaPredicted RBP8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 HLA-DRB5Q30154 266 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 OR52W1Q6IF63 320 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 ZNF497Q6ZNH5 498 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 ZNF565Q8N9K5 539 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 OR4K15Q8NH41 348 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 PHYHIPQ92561 330 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 THRSPQ92748 146 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 PCDHB16Q9NRJ7 776 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms