RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SPTBN4Q9H254 2564 aa5.91□□□□□ -1.46
CNOT1-222ENST00000570139 DOCK7Q96N67 2140 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF407Q9C0G0 2248 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 APC2O95996 2303 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 SAA2-SAA4A0A096LPE2 208 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 A0A0A6YYH2 397 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF816-ZNF321PA0A0X1KG74 233 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 C5orf49A4QMS7 147 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 NKX6-3A6NJ46 265 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 A6NJ64 397 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 PIN1P1O15428 100 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 MLNRO43193 412 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 LYZL6O75951 148 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 TOXO94900 526 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 OCMP0CE72 109 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-222ENST00000570139 IGHV4-38-2P0DP08 117 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 CD37P11049 281 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 SELEP16581 610 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF14P17017 642 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-222ENST00000570139 PRKACBP22694 351 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 CA7P43166 264 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 PITPNAQ00169 270 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 OR8B8Q15620 311 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 RAB11BQ15907 218 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF181Q2M3W8 571 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 RSPO1Q2MKA7 263 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-222ENST00000570139 HIKESHIQ53FT3 197 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 C1orf100Q5SVJ3 147 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 C9orf135Q5VTT2 229 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 C16orf87Q6PH81 154 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 XKRXQ6PP77 449 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 ERASQ7Z444 233 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 C5orf24Q7Z6I8 188 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 MDP1Q86V88 176 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 RDH10Q8IZV5 341 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 SLC30A7Q8NEW0 376 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 OR1M1Q8NGA1 313 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 OR10AC1Q8NH08 325 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF671Q8TAW3 534 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 TRMT10AQ8TBZ6 339 aaKnown RBP5.9□□□□□ -1.46
CNOT1-222ENST00000570139 TMEM37Q8WXS4 190 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 MUCL1Q96DR8 90 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 NDUFAF3Q9BU61 184 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 CHST5Q9GZS9 411 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 TAS2R4Q9NYW5 299 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 COMMD3Q9UBI1 195 aa5.9□□□□□ -1.46
CNOT1-222ENST00000570139 NOP16Q9Y3C1 178 aaKnown RBP5.9□□□□□ -1.46
CNOT1-222ENST00000570139 AK6Q9Y3D8 172 aaKnown RBP5.9□□□□□ -1.46
CNOT1-222ENST00000570139 PHF3Q92576 2039 aaKnown RBP5.9□□□□□ -1.47
CNOT1-222ENST00000570139 LOC400499M0QZD8 3231 aa5.9□□□□□ -1.47
CNOT1-222ENST00000570139 MED12LQ86YW9 2145 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 MED12Q93074 2177 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 ITPR1Q14643 2758 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 TRAV8-7A0A075B6U6 113 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 hCG_38984A0A1B0GV85 526 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 ISPDA4D126 451 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 FABP12A6NFH5 140 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 SAP30O75446 220 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 NDUFA7O95182 113 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 IGLV1-44P01699 117 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 MAS1P04201 325 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 SLC2A1P11166 492 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 ATF1P18846 271 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 AADACP22760 399 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 HTR2CP28335 458 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 FOXG1P55316 489 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-222ENST00000570139 OR10A3P58181 314 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 MRPS10P82664 201 aaKnown RBP5.89□□□□□ -1.47
CNOT1-222ENST00000570139 SRSF9Q13242 221 aaKnown RBP eCLIP5.89□□□□□ -1.47
CNOT1-222ENST00000570139 SLC25A35Q3KQZ1 300 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 CLVS2Q5SYC1 327 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 HACD4Q5VWC8 232 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 TMEM42Q69YG0 159 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 MRPL21Q7Z2W9 205 aaKnown RBP5.89□□□□□ -1.47
CNOT1-222ENST00000570139 NR2C2APQ86WQ0 139 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 GDPD1Q8N9F7 314 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 SECTM1Q8WVN6 248 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 SGK3Q96BR1 496 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 FGGYQ96C11 551 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 DIRAS2Q96HU8 199 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 LURAP1Q96LR2 239 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 ZNF75AQ96N20 296 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 NEDD4LQ96PU5 975 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 BCL2L14Q9BZR8 327 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 OPN3Q9H1Y3 402 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-222ENST00000570139 ABCG5Q9H222 651 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 TECRQ9NZ01 308 aaKnown RBP5.89□□□□□ -1.47
CNOT1-222ENST00000570139 PIGLQ9Y2B2 252 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 MEMO1Q9Y316 297 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 ACACAQ13085 2346 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 DNAJC13O75165 2243 aa5.89□□□□□ -1.47
CNOT1-222ENST00000570139 A0A1B0GUH1 482 aa5.88□□□□□ -1.47
CNOT1-222ENST00000570139 SNURFLB1AK76 121 aa5.88□□□□□ -1.47
CNOT1-222ENST00000570139 FAM25AB3EWG3 89 aa5.88□□□□□ -1.47
CNOT1-222ENST00000570139 FAM25CB3EWG5 89 aa5.88□□□□□ -1.47
CNOT1-222ENST00000570139 FAM25GB3EWG6 89 aa5.88□□□□□ -1.47
CNOT1-222ENST00000570139 EEF1E1-BLOC1S5C9J1V9 151 aa5.88□□□□□ -1.47
CNOT1-222ENST00000570139 EEF1E1O43324 174 aaKnown RBP5.88□□□□□ -1.47
CNOT1-222ENST00000570139 ZNF780AO75290 641 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms