RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 RHOFQ9HBH0 211 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 CBLN4Q9NTU7 201 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 SCN3BQ9NY72 215 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 SLC35A3Q9Y2D2 325 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 YLPM1P49750 1951 aaKnown RBP3.91□□□□□ -1.78
UBR1-208ENST00000569066 ADGRB2O60241 1585 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 A0A087X0T9 212 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 A0A1W2PPV4 95 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 EFCAB9A8MZ26 197 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 M0QXV9 152 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 SNAI2O43623 268 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 EIF4E2O60573 245 aaKnown RBP3.91□□□□□ -1.78
UBR1-208ENST00000569066 PIAS1O75925 651 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 CD2P06729 351 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 IGHV3-43DP0DP04 118 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 ZNF35P13682 527 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 ZNF14P17017 642 aaPredicted RBP3.91□□□□□ -1.78
UBR1-208ENST00000569066 MAGEA2P43356 314 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 CRISP3P54108 245 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 TAS2R39P59534 338 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 LYZP61626 148 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 EMX2Q04743 252 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 GGTLC2Q14390 218 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 ZNF235Q14590 738 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 OCIAD2Q56VL3 154 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 ZNF691Q5VV52 312 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 SAXO2Q658L1 398 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 GLYATQ6IB77 296 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 LAIR2Q6ISS4 152 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 SLC35E3Q7Z769 313 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 JAGN1Q8N5M9 183 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 NPBQ8NG41 125 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 OR11H7Q8NGC8 314 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 OR52E5Q8NH55 327 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 SPPL2BQ8TCT7 592 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 TMEM203Q969S6 136 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 CPB2Q96IY4 423 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 RDH12Q96NR8 316 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 PKMYT1Q99640 499 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 TBL1XR1Q9BZK7 514 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 ULBP1Q9BZM6 244 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 TM6SF2Q9BZW4 377 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 C1orf109Q9NX04 203 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 RASL12Q9NYN1 266 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 COMMD3Q9UBI1 195 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 PEF1Q9UBV8 284 aaKnown RBP3.91□□□□□ -1.78
UBR1-208ENST00000569066 YARS2Q9Y2Z4 477 aaKnown RBP3.91□□□□□ -1.78
UBR1-208ENST00000569066 V9GYH0 126 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 PZPP20742 1482 aa3.9□□□□□ -1.78
UBR1-208ENST00000569066 NFASCO94856 1347 aa3.9□□□□□ -1.78
UBR1-208ENST00000569066 MAGI3Q5TCQ9 1506 aa3.9□□□□□ -1.78
UBR1-208ENST00000569066 ABCA8O94911 1581 aa3.9□□□□□ -1.78
UBR1-208ENST00000569066 EXOC1LA0A1B0GW35 172 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 BTNL10A8MVZ5 291 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 C9J4A7 227 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 G3V3Q6 166 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 UBDO15205 165 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 SSNA1O43805 119 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 GGCTO75223 188 aaKnown RBP3.9□□□□□ -1.79
UBR1-208ENST00000569066 AQP8O94778 261 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 IGHV4-34P06331 123 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 CXCR1P25024 350 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 IVDP26440 423 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 CX3CR1P49238 355 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 DAOAP59103 153 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 ZNF726P1Q15940 193 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 OR5L1Q8NGL2 311 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 OR1N2Q8NGR9 330 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 DNAJB3Q8WWF6 145 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 MYOZ2Q9NPC6 264 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 ZNF230Q9UIE0 474 aaPredicted RBP3.9□□□□□ -1.79
UBR1-208ENST00000569066 ARHGAP21Q5T5U3 1957 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 COL2A1P02458 1487 aaPredicted RBP3.9□□□□□ -1.79
UBR1-208ENST00000569066 CAMTA1Q9Y6Y1 1673 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 TMEM218A2RU14 115 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 K7EMT4 169 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 MANBAO00462 879 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 SLC37A4O43826 429 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 IGLV1-47P01700 117 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 CXCL3P19876 107 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 HRH1P35367 487 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 COILP38432 576 aaPredicted RBP3.9□□□□□ -1.79
UBR1-208ENST00000569066 RND2P52198 227 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 WNT4P56705 351 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 CLDN18P56856 261 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 PPP3R1P63098 170 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 SF3A2Q15428 464 aaKnown RBP3.9□□□□□ -1.79
UBR1-208ENST00000569066 OR4D1Q15615 310 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 BSXQ3C1V8 233 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 C10orf91Q5T1B1 145 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 C10orf107Q8IVU9 208 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 PDZD9Q8IXQ8 264 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 FAM71E2Q8N5Q1 922 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 DUSP18Q8NEJ0 188 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 OR2Z1Q8NG97 314 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 TERB2Q8NHR7 220 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 C11orf40Q8WZ69 217 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 RORBQ92753 470 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 PIK3IP1Q96FE7 263 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 AURKBQ96GD4 344 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms