RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 FAM90A20PA6NIJ5 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A8PA6NJQ4 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A7PA6NKC0 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 TRIM64CA6NLI5 447 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A22PA8MWA6 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A12PA8MX19 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A5PA8MXJ8 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A23PA8MXZ1 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 CRTAPO75718 401 aaPredicted RBP7.96□□□□□ -1.14
CLK3-220ENST00000567992 BPNT1O95861 308 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 IGHV4-59P01825 116 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A15PP0C7V4 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A13PP0C7W8 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A14PP0C7W9 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A24PP0C7X0 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 PAX6P26367 422 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 CFPP27918 469 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 IER3P46695 156 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 ALDH3B2P48448 385 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 OR10A3P58181 314 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 RPS27AP62979 156 aaKnown RBP7.96□□□□□ -1.14
CLK3-220ENST00000567992 LSAMPQ13449 338 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 P2RY14Q15391 338 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 NEDD8Q15843 81 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 C22orf42Q6IC83 251 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 SLC35E4Q6ICL7 350 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 HEPN1Q6WQI6 88 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 TRAPPC6BQ86SZ2 158 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 RTN4RL2Q86UN3 420 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 NR2C2APQ86WQ0 139 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 DYNAPQ8N1N2 210 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 GAPTQ8N292 157 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 TMEM86BQ8N661 226 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 CST11Q9H112 138 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 TMEM133Q9H2Q1 129 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 GAL3ST2Q9H3Q3 398 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 HEXA-AS1Q9H8Q6 139 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 LINC00574Q9H8X3 128 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 VCX3AQ9NNX9 186 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 PCDHB16Q9NRJ7 776 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 STUB1Q9UNE7 303 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 MEIKINA0A087WXM9 373 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 A0A087X0M5 115 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 IGHV2-26A0A0B4J1V2 119 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 TRAV39A0A0B4J263 110 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 KBTBD11-OT1A0A1B0GTJ5 212 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 A0A1B0GX30 115 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 ZNF729A6NN14 1252 aaPredicted RBP7.95□□□□□ -1.14
CLK3-220ENST00000567992 FOXI3A8MTJ6 420 aaPredicted RBP7.95□□□□□ -1.14
CLK3-220ENST00000567992 NPIPB11E5RHQ5 1161 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 LDLRAD4O15165 306 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 MPIG6BO95866 241 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 FBP1P09467 338 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 OMGP23515 440 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 CDK2P24941 298 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 FGF9P31371 208 aaPredicted RBP7.95□□□□□ -1.14
CLK3-220ENST00000567992 SSTR5P35346 364 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 GLP1RP43220 463 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 CLDN12P56749 244 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 PLA2G7Q13093 441 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 DYNC1I2Q13409 638 aaKnown RBP7.95□□□□□ -1.14
CLK3-220ENST00000567992 ATAD3CQ5T2N8 411 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 RAB12Q6IQ22 244 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 ZNF497Q6ZNH5 498 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 LHFPL4Q7Z7J7 247 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 BEND2Q8NDZ0 799 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 TSPAN14Q8NG11 270 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 OR4P4Q8NGL7 312 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 OR13D1Q8NGV5 346 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 SPATA3Q8NHX4 192 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 SSMEM1Q8WWF3 244 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 DYRK2Q92630 601 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 TAF15Q92804 592 aaKnown RBP eCLIP7.95□□□□□ -1.14
CLK3-220ENST00000567992 KIRREL1Q96J84 757 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 NICN1Q9BSH3 213 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 TM2D1Q9BX74 207 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 TMEM59Q9BXS4 323 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 BARHL1Q9BZE3 327 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 CHIAQ9BZP6 476 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 LPAR5Q9H1C0 372 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 OR51E2Q9H255 320 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 ZNF286AQ9HBT8 521 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 SPACA1Q9HBV2 294 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 TXNL4BQ9NX01 149 aaKnown RBP7.95□□□□□ -1.14
CLK3-220ENST00000567992 CALYQ9NYX4 217 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 PTTG2Q9NZH5 202 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 OR6C3Q9NZP0 311 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 POMT1Q9Y6A1 747 aa7.95□□□□□ -1.14
CLK3-220ENST00000567992 TMEM30CPA0ZSE6 113 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 TMEM89A2RUT3 159 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 FAM172BPA6NC97 362 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 C15orf65H3BRN8 121 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 PDCD6O75340 191 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 IL1AP01583 271 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 IGLV1-47P01700 117 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 MT-ND4P03905 459 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 ARG1P05089 322 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 FUT3P21217 361 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 CHATP28329 748 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms