RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 MEIKINA0A087WXM9 373 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 MRPS14O60783 128 aaKnown RBP14.86□□□□□ -0.03
LINC01238-205ENST00000567549 CRHBPP24387 322 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 RPL5P46777 297 aaKnown RBP14.86□□□□□ -0.03
LINC01238-205ENST00000567549 PAX5Q02548 391 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 MADCAM1Q13477 382 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 RSU1Q15404 277 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 TMEM95Q3KNT9 176 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 Q6P435 159 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 LHFPL3Q86UP9 236 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 OR8H3Q8N146 312 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 OSR2Q8N2R0 312 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 CHPT1Q8WUD6 406 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 RNF166Q96A37 237 aaPredicted RBP14.86□□□□□ -0.03
LINC01238-205ENST00000567549 PLCXD1Q9NUJ7 323 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 AURKAIP1Q9NWT8 199 aaPredicted RBP14.86□□□□□ -0.03
LINC01238-205ENST00000567549 ING3Q9NXR8 418 aa14.86□□□□□ -0.03
LINC01238-205ENST00000567549 IRGMA1A4Y4 181 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 A6NHS1 94 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 TRIM64CA6NLI5 447 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 IL1AP01583 271 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 PRB2P02812 416 aaPredicted RBP14.85□□□□□ -0.03
LINC01238-205ENST00000567549 SMIM18P0DKX4 95 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 JUNBP17275 347 aaPredicted RBP14.85□□□□□ -0.03
LINC01238-205ENST00000567549 PPP3R1P63098 170 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 SLC35B1P78383 322 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 HES1Q14469 280 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 FOXB2Q5VYV0 432 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 HIST2H2BDQ6DRA6 164 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 Q6ZS46 218 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 COMMD1Q8N668 190 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 BPIFB6Q8NFQ5 453 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 OR10AC1Q8NH08 325 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 CNIH3Q8TBE1 160 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 TNFAIP8L1Q8WVP5 186 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 MYDGFQ969H8 173 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 COQ2Q96H96 371 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 KIRREL1Q96J84 757 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 MCRIP2Q9BUT9 160 aaKnown RBP14.85□□□□□ -0.03
LINC01238-205ENST00000567549 JAM3Q9BX67 310 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 ERVK13-1Q9NX77 482 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 CALYQ9NYX4 217 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 NDUFA13Q9P0J0 144 aa14.85□□□□□ -0.03
LINC01238-205ENST00000567549 PSMB11A5LHX3 300 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 FAM172BPA6NC97 362 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 J3QR06 171 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 FGF16O43320 207 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 ZFPL1O95159 310 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 CSTBP04080 98 aaKnown RBP14.84□□□□□ -0.03
LINC01238-205ENST00000567549 GZMHP20718 246 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 CD24P25063 80 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 ZP1P60852 638 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 CCDC58Q4VC31 144 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 ZNF773Q6PK81 442 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 LINC00596Q86U02 117 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 SATL1Q86VE3 508 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 OR10X1Q8NGY0 326 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 GPR148Q8TDV2 347 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 FAM192AQ9GZU8 254 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 VCX3AQ9NNX9 186 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 IDI2-AS1Q9NZ38 188 aa14.84□□□□□ -0.03
LINC01238-205ENST00000567549 LY6LH3BQJ8 138 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 ZNF780AO75290 641 aaPredicted RBP14.83□□□□□ -0.04
LINC01238-205ENST00000567549 IGLL1P15814 213 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 GABRB1P18505 474 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 CDK5R1Q15078 307 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 LAIR2Q6ISS4 152 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 TMPRSS11AQ6ZMR5 421 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 FOXRED2Q8IWF2 684 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 GON7Q9BXV9 100 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 METTL9Q9H1A3 318 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 DUSP21Q9H596 190 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 LINC00574Q9H8X3 128 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 ZFP57Q9NU63 452 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 KIF25Q9UIL4 384 aa14.83□□□□□ -0.04
LINC01238-205ENST00000567549 DPPA5A6NC42 116 aa14.82□□□□□ -0.04
LINC01238-205ENST00000567549 HSPB6O14558 160 aa14.82□□□□□ -0.04
LINC01238-205ENST00000567549 WBP4O75554 376 aaKnown RBP14.82□□□□□ -0.04
LINC01238-205ENST00000567549 TFAP2AP05549 437 aa14.82□□□□□ -0.04
LINC01238-205ENST00000567549 TMEM11P17152 192 aa14.82□□□□□ -0.04
LINC01238-205ENST00000567549 IL3RAP26951 378 aa14.82□□□□□ -0.04
LINC01238-205ENST00000567549 GTF2A1P52655 376 aaPredicted RBP14.82□□□□□ -0.04
LINC01238-205ENST00000567549 C17orf58Q2M2W7 97 aa14.82□□□□□ -0.04
LINC01238-205ENST00000567549 RPL22L1Q6P5R6 122 aaKnown RBP14.82□□□□□ -0.04
LINC01238-205ENST00000567549 PDCD1LG2Q9BQ51 273 aa14.82□□□□□ -0.04
LINC01238-205ENST00000567549 PPIL3Q9H2H8 161 aaKnown RBP14.82□□□□□ -0.04
LINC01238-205ENST00000567549 TMEM138Q9NPI0 162 aa14.82□□□□□ -0.04
LINC01238-205ENST00000567549 PTGES3LE9PB15 166 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 SNRNP70P08621 437 aaKnown RBP14.81□□□□□ -0.04
LINC01238-205ENST00000567549 GP2P55259 537 aaKnown RBP14.81□□□□□ -0.04
LINC01238-205ENST00000567549 GPR176Q14439 515 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 NHLRC3Q5JS37 347 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 STX19Q8N4C7 294 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 Q8NFD4 153 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 OR56B4Q8NH76 319 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 APH1BQ8WW43 257 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 IFT22Q9H7X7 185 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 ISG20L2Q9H9L3 353 aaKnown RBP14.81□□□□□ -0.04
LINC01238-205ENST00000567549 MRPS18AQ9NVS2 196 aaKnown RBP14.81□□□□□ -0.04
LINC01238-205ENST00000567549 IL36GQ9NZH8 169 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms