RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 CHST1O43916 411 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 SEMA7AO75326 666 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 ONECUT2O95948 504 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 CLEC3BP05452 202 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 CD99P14209 185 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 F2RP25116 425 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 ZNF260Q3ZCT1 412 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 FAM27BQ5VT28 67 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 FAM78BQ5VT40 261 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 LINC00518Q8N0U6 118 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 OR1L3Q8NH93 324 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 OR1L1Q8NH94 360 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 DTD1Q8TEA8 209 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 AQP3Q92482 292 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 ATG101Q9BSB4 218 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 C19orf24Q9BVV8 132 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 CHRNA10Q9GZZ6 450 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 TUBA4BQ9H853 241 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 RCC2Q9P258 522 aaKnown RBP3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 METTL1Q9UBP6 276 aaKnown RBP3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 ZNF835Q9Y2P0 537 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 MIA3Q5JRA6 1907 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 TRAV8-7A0A075B6U6 113 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 TRGV5A0A0B4J1U4 118 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 H3BP45 60 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 ERVH48-1M5A8F1 160 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 AQP7O14520 342 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 PRF1P14222 555 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 CDAP32320 146 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 CEACAM3P40198 252 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 COMPP49747 757 aaPredicted RBP3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 NXPH1P58417 271 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 POLR2GP62487 172 aaKnown RBP eCLIP3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 RNF151Q2KHN1 245 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 VHLLQ6RSH7 139 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 CBLN3Q6UW01 205 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 CBLN2Q8IUK8 224 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 C10orf111Q8N326 155 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 GVQW1Q8N7I0 195 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 OR4B1Q8NGF8 309 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 TMEM230Q96A57 120 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 ALKBH3Q96Q83 286 aaPredicted RBP3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 TPPP3Q9BW30 176 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 GPR27Q9NS67 375 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 TMEM38BQ9NVV0 291 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 NPTNQ9Y639 398 aa3.82□□□□□ -1.8
LPCAT2-208ENST00000566915 NPIPB9F8W1W9 429 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 SOCS1O15524 211 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 ZNF253O75346 499 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 IGHMP01871 453 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 HBZP02008 142 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 BCL3P20749 454 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 ATP6V0CP27449 155 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 RPL29P47914 159 aaKnown RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 PRRX1P54821 245 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 ZNF816Q0VGE8 651 aaPredicted RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 OR52L2PQ8NGH6 319 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 OR1L6Q8NGR2 347 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 MRPL30Q8TCC3 161 aaKnown RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 TMEM190Q8WZ59 177 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 C1QTNF6Q9BXI9 259 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 ZNF230Q9UIE0 474 aaPredicted RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 KCNE5Q9UJ90 142 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 VSIG4Q9Y279 399 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 TRIP11Q15643 1979 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 A0A1W2PNV4 684 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 LOC390937A0A1W2PQ73 354 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 KIAA1324LA8MWY0 1029 aaPredicted RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 MELTFP08582 738 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 VSIG10L2P0DP72 767 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 PMCHP20382 165 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 BRS3P32247 399 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 CDX1P47902 265 aaPredicted RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 RPS11P62280 158 aaKnown RBP eCLIP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 ZNF774Q6NX45 483 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 ASCL5Q7RTU5 278 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 SLC16A13Q7RTY0 426 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 PUSL1Q8N0Z8 303 aaKnown RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 PRSS3P2Q8NHM4 247 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 FGF11Q92914 225 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 MRPL24Q96A35 216 aaKnown RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 PSMG3Q9BT73 122 aaPredicted RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 SFXN3Q9BWM7 321 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 MAP1LC3CQ9BXW4 147 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 ZNF355PQ9NSJ1 428 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 OR5AC2Q9NZP5 309 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 GOLT1BQ9Y3E0 138 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 MCM3APO60318 1980 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 GCM2O75603 506 aaPredicted RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 FTH1P19P0C7X4 201 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 HTR1DP28221 377 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 SELENOTP62341 195 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 TMEM267Q0VDI3 215 aaPredicted RBP3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 OR5I1Q13606 314 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 HES1Q14469 280 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 HFEQ30201 348 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 SMUG1Q53HV7 270 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 GRAMD2BQ96HH9 432 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 GPA33Q99795 319 aa3.81□□□□□ -1.8
LPCAT2-208ENST00000566915 RPP25Q9BUL9 199 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms