RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 FGF12P61328 243 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 RPS23P62266 143 aaKnown RBP6.23□□□□□ -1.41
SMG1-210ENST00000565224 CCL20P78556 96 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 PRDX4Q13162 271 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 KIR2DS1Q14954 304 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 HIKESHIQ53FT3 197 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 NMSQ5H8A3 153 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 CXorf66Q5JRM2 361 aaPredicted RBP6.23□□□□□ -1.41
SMG1-210ENST00000565224 ADAM5Q6NVV9 412 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 SPSB3Q6PJ21 355 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 SAXO1Q8IYX7 474 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 CLEC18CQ8NCF0 446 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 OR5C1Q8NGR4 320 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 TCEAL3Q969E4 200 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 GNPNAT1Q96EK6 184 aaPredicted RBP6.23□□□□□ -1.41
SMG1-210ENST00000565224 ZNF845Q96IR2 970 aaPredicted RBP6.23□□□□□ -1.41
SMG1-210ENST00000565224 ABHD14AQ9BUJ0 271 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 GLRX2Q9NS18 164 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 KIAA1456Q9P272 454 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 SIT1Q9Y3P8 196 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 PUS1Q9Y606 427 aaKnown RBP eCLIP6.23□□□□□ -1.41
SMG1-210ENST00000565224 CNOT1A5YKK6 2376 aaKnown RBP6.23□□□□□ -1.41
SMG1-210ENST00000565224 SHANK1Q9Y566 2161 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 KIAA1549Q9HCM3 1950 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 IGKV1D-13A0A0B4J2D9 117 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 SLC22A20A6NK97 555 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 ZNF732B4DXR9 585 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 OR2C1O95371 312 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 IFNA17P01571 189 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 IGHV3-9P01782 118 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 CTXN2P0C2S0 81 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 IGKV1-13P0DP09 117 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 UCP1P25874 307 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 ITGA3P26006 1051 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 GDF1P27539 372 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 OTX2P32243 289 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 HAAOP46952 286 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 DYNLT3P51808 116 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 OR2B8PP59922 312 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 ID3Q02535 119 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 Q0VFX4 171 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 HERPUD1Q15011 391 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 PPP1R32Q7Z5V6 425 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 C1QL4Q86Z23 238 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 YPEL4Q96NS1 127 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 SIGLEC12Q96PQ1 595 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 REPIN1Q9BWE0 567 aaKnown RBP6.23□□□□□ -1.41
SMG1-210ENST00000565224 MRPS18CQ9Y3D5 142 aaKnown RBP6.23□□□□□ -1.41
SMG1-210ENST00000565224 RFNGQ9Y644 331 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 SDK2Q58EX2 2172 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 CNTRLQ7Z7A1 2325 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 H0Y980 276 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 AP4M1O00189 453 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 DLL1O00548 723 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 HSD17B6O14756 317 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 MRPL33O75394 65 aaKnown RBP6.22□□□□□ -1.41
SMG1-210ENST00000565224 CST7O76096 145 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 TMEM50AO95807 157 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 OR8U8P0C7N1 319 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 NQO2P16083 231 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 DUSP3P51452 185 aaPredicted RBP6.22□□□□□ -1.41
SMG1-210ENST00000565224 GPM6AP51674 278 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 GFRA1P56159 465 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 ARF1P84077 181 aaKnown RBP6.22□□□□□ -1.41
SMG1-210ENST00000565224 MPV17LQ2QL34 196 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 ACER2Q5QJU3 275 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 C5orf24Q7Z6I8 188 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 ODF3L1Q8IXM7 274 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 ZDHHC23Q8IYP9 409 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 CMTM1Q8IZ96 169 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 IL22RA1Q8N6P7 574 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 PLPPR1Q8TBJ4 325 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 NEK7Q8TDX7 302 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 TCTEX1D2Q8WW35 142 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 IL22RA2Q969J5 263 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 HS3ST6Q96QI5 342 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 IER2Q9BTL4 223 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 FGF23Q9GZV9 251 aaPredicted RBP6.22□□□□□ -1.41
SMG1-210ENST00000565224 CCL28Q9NRJ3 127 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 DEPPQ9NTK1 212 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 IGKV3D-15A0A087WSY6 115 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 CCDC163A0A0D9SF12 145 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 PINLYPA6NC86 204 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 TRAPPC2LH3BP13 241 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 H3BQ15 152 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 LINC01387J3KSC0 135 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 WRBO00258 174 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 FABP1P07148 127 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 SRP19P09132 144 aaKnown RBP6.22□□□□□ -1.41
SMG1-210ENST00000565224 CEACAM1P13688 526 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 CCNOP22674 350 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 RPS18P62269 152 aaKnown RBP6.22□□□□□ -1.41
SMG1-210ENST00000565224 OR8G1Q15617 311 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 HAGHQ16775 308 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 CEACAM21Q3KPI0 293 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 AKR1C8PQ5T2L2 129 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 SP5Q6BEB4 398 aaPredicted RBP6.22□□□□□ -1.41
SMG1-210ENST00000565224 SLC23A3Q6PIS1 610 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 DPPA3Q6W0C5 159 aa6.22□□□□□ -1.41
SMG1-210ENST00000565224 HEPN1Q6WQI6 88 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms