RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 UNC119Q13432 240 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 P2RY14Q15391 338 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 PAN3Q58A45 887 aaKnown RBP12.82□□□□□ -0.36
USB1-208ENST00000563207 METTL11BQ5VVY1 283 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 SFXN4Q6P4A7 337 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 NR2C2APQ86WQ0 139 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 OR4S1Q8NGB4 309 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 FAM46BQ96A09 425 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 CHST6Q9GZX3 395 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 LIN7BQ9HAP6 207 aa12.82□□□□□ -0.36
USB1-208ENST00000563207 RCC2Q9P258 522 aaKnown RBP12.82□□□□□ -0.36
USB1-208ENST00000563207 hCG_1809904A0A1W2PP81 198 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 A0A1W2PPE2 198 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 A0A1W2PR64 198 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 A0A1W2PRV1 198 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 hADV38S2A0JD32 116 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 MCRIP1C9JLW8 97 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 M0R1W7 72 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 LDLRAD4O15165 306 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 IGHV4-59P01825 116 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 RAB6AP20340 208 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 P2RX3P56373 397 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 CLDN12P56749 244 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 KRTAP10-3P60369 221 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 LSM3P62310 102 aaKnown RBP12.81□□□□□ -0.36
USB1-208ENST00000563207 MXD1Q05195 221 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 BLMHQ13867 455 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 PDCD1Q15116 288 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 ATAD3CQ5T2N8 411 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 GPR107Q5VW38 600 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 SLC16A12Q6ZSM3 486 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 FAM89BQ8N5H3 189 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 SUMF2Q8NBJ7 301 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 DPCDQ9BVM2 203 aaPredicted RBP12.81□□□□□ -0.36
USB1-208ENST00000563207 PPA2Q9H2U2 334 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 C1RLQ9NZP8 487 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 DAPK2Q9UIK4 370 aa12.81□□□□□ -0.36
USB1-208ENST00000563207 IGHV1-69DA0A0B4J2H0 117 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 PDCD6O75340 191 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 CA11O75493 328 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 IGHV1-69P01742 117 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 RBP4P02753 201 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 TMBIM6P55061 237 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 EDDM3BP56851 147 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 CTF1Q16619 201 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 TMEM200BQ69YZ2 307 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 OR10K2Q6IF99 312 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 VMO1Q7Z5L0 202 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 FAM185AQ8N0U4 392 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 PNKDQ8N490 385 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 RAB2BQ8WUD1 216 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 NEDD4LQ96PU5 975 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 LPAR5Q9H1C0 372 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 C19orf12Q9NSK7 152 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 OR6C3Q9NZP0 311 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 UBE2J1Q9Y385 318 aaPredicted RBP12.8□□□□□ -0.36
USB1-208ENST00000563207 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 VWFP04275 2813 aa12.8□□□□□ -0.36
USB1-208ENST00000563207 TMEM272A0A1B0GTI8 110 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 A0A1W2PRD5 423 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 A0A1W2PRF3 423 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 A0A1W2PRM7 423 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 METTL21EPA6NDL7 271 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 RPS19P39019 145 aaKnown RBP12.79□□□□□ -0.36
USB1-208ENST00000563207 BPIFB3P59826 476 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 VBP1P61758 197 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 AESQ08117 197 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 EDDM3AQ14507 147 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 KRBOX4Q5JUW0 171 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 SLC35E4Q6ICL7 350 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 RAB12Q6IQ22 244 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 ZNF565Q8N9K5 539 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 OR4M1Q8NGD0 313 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 OR56B1Q8NGI3 324 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 CORO2AQ92828 525 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 METTL8Q9H825 291 aaKnown RBP12.79□□□□□ -0.36
USB1-208ENST00000563207 ABRACLQ9P1F3 81 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 ONECUT1Q9UBC0 465 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 HSF4Q9ULV5 492 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 PEX16Q9Y5Y5 336 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 ETV7Q9Y603 341 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 KIAA2026Q5HYC2 2103 aa12.79□□□□□ -0.36
USB1-208ENST00000563207 TRGV10A0A0A0MS01 117 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 ODAMA1E959 279 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 POM121CA8CG34 1229 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 SCGNO76038 276 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 SLC2A2P11168 524 aaPredicted RBP12.78□□□□□ -0.36
USB1-208ENST00000563207 SERPINB10P48595 397 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 RAG2P55895 527 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 NCS1P62166 190 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 KLRD1Q13241 179 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 ATXN7L3Q14CW9 347 aaPredicted RBP12.78□□□□□ -0.36
USB1-208ENST00000563207 SIGIRRQ6IA17 410 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 METAP1DQ6UB28 335 aaPredicted RBP12.78□□□□□ -0.36
USB1-208ENST00000563207 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 CLVS1Q8IUQ0 354 aaPredicted RBP12.78□□□□□ -0.36
USB1-208ENST00000563207 Q8N7P7 452 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms