RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 GAL3ST2Q9H3Q3 398 aa15.51■□□□□ 0.07
RAB40C-207ENST00000563109 CHMP1AQ9HD42 196 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-207ENST00000563109 ABCA1O95477 2261 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 A0A075B6Q4 140 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 M0R1W7 72 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 HIST1H1DP16402 221 aaKnown RBP15.5■□□□□ 0.07
RAB40C-207ENST00000563109 HNF1AP20823 631 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 TMEM50BP56557 158 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 ARF6P62330 175 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 PAX8Q06710 450 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 CR1LQ2VPA4 569 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 PLAC9Q5JTB6 97 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 DYRK2Q92630 601 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 TMPRSS13Q9BYE2 586 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 GSX1Q9H4S2 264 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-207ENST00000563109 ADAM30Q9UKF2 790 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 TRAPPC2LQ9UL33 140 aa15.5■□□□□ 0.07
RAB40C-207ENST00000563109 MED13LQ71F56 2210 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 MEX3AA1L020 520 aaKnown RBP15.49■□□□□ 0.07
RAB40C-207ENST00000563109 SERPINE3A8MV23 424 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 RGS5O15539 181 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 HPGDSO60760 199 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 TOX4O94842 621 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 APOA1P02647 267 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 CD3GP09693 182 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 ZNF728P0DKX0 622 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 GNB3P16520 340 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 CCL3L1P16619 93 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 ZNF565Q8N9K5 539 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 CORO2AQ92828 525 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 WDFY2Q96P53 400 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 PCGF1Q9BSM1 259 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 RIMS4Q9H426 269 aaPredicted RBP15.49■□□□□ 0.07
RAB40C-207ENST00000563109 C12orf4Q9NQ89 552 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 BATF3Q9NR55 127 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 TAS2R3Q9NYW6 316 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 AK3Q9UIJ7 227 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 CELSR1Q9NYQ6 3014 aa15.49■□□□□ 0.07
RAB40C-207ENST00000563109 FAM25AB3EWG3 89 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 FAM25CB3EWG5 89 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 FAM25GB3EWG6 89 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 MFNGO00587 321 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 MT-ND4P03905 459 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 C6orf183Q5T699 404 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 TRAT1Q6PIZ9 186 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 TCF23Q7RTU1 214 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 RTN4RL2Q86UN3 420 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 MCFD2Q8NI22 146 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 MRGPRDQ8TDS7 321 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 CCDC107Q8WV48 283 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 CMSS1Q9BQ75 279 aaKnown RBP15.48■□□□□ 0.07
RAB40C-207ENST00000563109 C6orf62Q9GZU0 229 aaPredicted RBP15.48■□□□□ 0.07
RAB40C-207ENST00000563109 SIRPDQ9H106 197 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 TMEM160Q9NX00 188 aa15.48■□□□□ 0.07
RAB40C-207ENST00000563109 ACANP16112 2415 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 ZNF729A6NN14 1252 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-207ENST00000563109 RBP4P02753 201 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 EIF4EP06730 217 aaKnown RBP15.47■□□□□ 0.07
RAB40C-207ENST00000563109 GSTP1P09211 210 aaKnown RBP15.47■□□□□ 0.07
RAB40C-207ENST00000563109 CDK2P24941 298 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 ARFRP1Q13795 201 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 CDNFQ49AH0 187 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 TMEM69Q5SWH9 247 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 FOXB2Q5VYV0 432 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 C1orf122Q6ZSJ8 110 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 Q71RC1 249 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-207ENST00000563109 MOB1BQ7L9L4 216 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 VMO1Q7Z5L0 202 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 GAPTQ8N292 157 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 OR13A1Q8NGR1 328 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 OR4K15Q8NH41 348 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 SETD6Q8TBK2 473 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 SLIRPQ9GZT3 109 aaKnown RBP15.47■□□□□ 0.07
RAB40C-207ENST00000563109 METTL8Q9H825 291 aaKnown RBP15.47■□□□□ 0.07
RAB40C-207ENST00000563109 ZMAT3Q9HA38 289 aaKnown RBP15.47■□□□□ 0.07
RAB40C-207ENST00000563109 RAB9BQ9NP90 201 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 KCNIP1Q9NZI2 227 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 HIVEP1P15822 2718 aa15.47■□□□□ 0.07
RAB40C-207ENST00000563109 F8P00451 2351 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 TRAV18A0A075B6X5 111 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 XRCC3O43542 346 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 CLPXO76031 633 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 TALDO1P37837 337 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 MNDAP41218 407 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 GNG2P59768 71 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 ERVFRD-1P60508 538 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 FAM120AOSQ5T036 256 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 OLFML2AQ68BL7 652 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 MRPL30Q8TCC3 161 aaKnown RBP15.46■□□□□ 0.07
RAB40C-207ENST00000563109 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.46■□□□□ 0.07
RAB40C-207ENST00000563109 CALYQ9NYX4 217 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 OPN4Q9UHM6 478 aa15.46■□□□□ 0.07
RAB40C-207ENST00000563109 TRAV39A0A0B4J263 110 aa15.45■□□□□ 0.06
RAB40C-207ENST00000563109 A6NHS1 94 aa15.45■□□□□ 0.06
RAB40C-207ENST00000563109 C17orf98A8MV24 154 aa15.45■□□□□ 0.06
RAB40C-207ENST00000563109 NAPSAO96009 420 aa15.45■□□□□ 0.06
RAB40C-207ENST00000563109 MMP9P14780 707 aa15.45■□□□□ 0.06
RAB40C-207ENST00000563109 ELK1P19419 428 aa15.45■□□□□ 0.06
RAB40C-207ENST00000563109 GZMHP20718 246 aa15.45■□□□□ 0.06
RAB40C-207ENST00000563109 DLX6P56179 175 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms