RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GLP1RP43220 463 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 CLDN12P56749 244 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 BAMBIQ13145 260 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 MIDNQ504T8 468 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 HES5Q5TA89 166 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 HEPN1Q6WQI6 88 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 TPRA1Q86W33 373 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 PNKDQ8N490 385 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 ZNF565Q8N9K5 539 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 OR51D1Q8NGF3 324 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 OR13A1Q8NGR1 328 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 NEK7Q8TDX7 302 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 TMEM158Q8WZ71 300 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 FAM3DQ96BQ1 224 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 KCTD7Q96MP8 289 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 CHCHD6Q9BRQ6 235 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 ZMAT3Q9HA38 289 aaKnown RBP13.63□□□□□ -0.23
CLK3-207ENST00000562389 PEX16Q9Y5Y5 336 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 A0A1W2PRD5 423 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 A0A1W2PRF3 423 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 A0A1W2PRM7 423 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 MEIOCA2RUB1 952 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 DNAJC9-AS1A6NH13 148 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 CLDN34H7C241 214 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 TRIM77I1YAP6 450 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 AIPO00170 330 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 MMP23AO75900 390 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 SMIM18P0DKX4 95 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 COX7A1P24310 79 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 UBA52P62987 128 aaKnown RBP13.62□□□□□ -0.23
CLK3-207ENST00000562389 C17orf58Q2M2W7 97 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 KRTAP24-1Q3LI83 254 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 TIMM50Q3ZCQ8 353 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 BRICD5Q6PL45 260 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 Q6YL49 198 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 ZNF497Q6ZNH5 498 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 GDPGP1Q6ZNW5 385 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 NR2C2APQ86WQ0 139 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 LDLRAD3Q86YD5 345 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 OR11H6Q8NGC7 330 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 ZDHHC16Q969W1 377 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 YIPF6Q96EC8 236 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 NICN1Q9BSH3 213 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 URM1Q9BTM9 101 aaKnown RBP13.62□□□□□ -0.23
CLK3-207ENST00000562389 LPAR5Q9H1C0 372 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 TMEM133Q9H2Q1 129 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 ETAA1Q9NY74 926 aa13.62□□□□□ -0.23
CLK3-207ENST00000562389 LOC100506127A0A0U1RQW1 187 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 KBTBD11-OT1A0A1B0GTJ5 212 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 ODF3BA8MYP8 253 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 LDLRAD4O15165 306 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 CA11O75493 328 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 FBP1P09467 338 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 CDK2P24941 298 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 CHATP28329 748 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 C2orf76Q3KRA6 126 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 PRAMEF5Q5TYX0 476 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 ZNF626Q68DY1 528 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 OR52W1Q6IF63 320 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 GAPTQ8N292 157 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 MRGPRDQ8TDS7 321 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 NEDD4LQ96PU5 975 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 LINC00574Q9H8X3 128 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 CALYQ9NYX4 217 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 FAM96BQ9Y3D0 163 aa13.61□□□□□ -0.23
CLK3-207ENST00000562389 A0A0A6YYD4 124 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 IGHV2-26A0A0B4J1V2 119 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 TMEM272A0A1B0GTI8 110 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 RNF212BA8MTL3 300 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 NOTOA8MTQ0 251 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 IL1AP01583 271 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 MT-ND4P03905 459 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 MELTFP08582 738 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 GDNFP39905 211 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 SLC9A3R2Q15599 337 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 NKAPLQ5M9Q1 402 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 FAM89BQ8N5H3 189 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 TMEM86BQ8N661 226 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 MDFIQ99750 246 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 CENPOQ9BU64 300 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 CLEC7AQ9BXN2 247 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 RNF167Q9H6Y7 350 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 ZNRD1Q9P1U0 126 aa13.6□□□□□ -0.23
CLK3-207ENST00000562389 TBL2Q9Y4P3 447 aaKnown RBP13.6□□□□□ -0.23
CLK3-207ENST00000562389 A0A087X0M5 115 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 A0A1B0GX30 115 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 UBE2QL1A1L167 161 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 NPIPB11E5RHQ5 1161 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 HOXA3O43365 443 aaPredicted RBP13.59□□□□□ -0.23
CLK3-207ENST00000562389 PAHP00439 452 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 ARG1P05089 322 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 GZMHP20718 246 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 OMGP23515 440 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 CD34P28906 385 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 SDC2P34741 201 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 LGALS4P56470 323 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 RTN4RL2Q86UN3 420 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 OR10A7Q8NGE5 316 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 SSMEM1Q8WWF3 244 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms